Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 EXTL2P1-201ENST00000446218 416 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 RPS15AP17-201ENST00000470598 390 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 RPS4XP13-201ENST00000483219 789 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC007686.1-201ENST00000488511 463 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC004062.1-201ENST00000509926 645 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC010342.1-201ENST00000514047 877 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN1BQ07699 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC105129.1-201ENST00000560250 297 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AADACP1-206ENST00000561502 1193 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN1BQ07699 AC012669.1-201ENST00000603209 283 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC008782.1-201ENST00000603386 430 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 RPL23AP92-201ENST00000603609 255 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC021749.1-201ENST00000604322 607 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC055876.5-201ENST00000605667 259 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC011816.2-201ENST00000607089 556 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AL445423.1-201ENST00000609941 536 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 AC006065.6-201ENST00000625201 545 ntBASIC3.78□□□□□ -1.8
SCN1BQ07699 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN1BQ07699 AL365440.1-201ENST00000436135 2167 ntBASIC3.78□□□□□ -1.81
SCN1BQ07699 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN1BQ07699 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN1BQ07699 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 RNU6-878P-201ENST00000384578 110 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 MIR550A3-201ENST00000390735 95 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
SCN1BQ07699 RNU4-22P-201ENST00000411058 166 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 RNU2-71P-201ENST00000411395 189 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 RHEBP3-201ENST00000411920 351 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 NRBF2P2-201ENST00000413087 861 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 RPS3AP37-201ENST00000419176 745 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC087650.1-201ENST00000431445 468 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 CYCSP43-201ENST00000438233 310 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 EEF1A1P39-201ENST00000440791 250 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN1BQ07699 MTCYBP11-201ENST00000447254 1109 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN1BQ07699 AL031313.1-201ENST00000448435 256 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 SLC31A1P1-201ENST00000451221 567 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 HMGB1P15-201ENST00000453854 435 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 CEACAMP4-201ENST00000457676 421 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 RPL7P22-201ENST00000466005 733 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC092324.1-201ENST00000468671 324 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN1BQ07699 AC006390.1-201ENST00000508068 283 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC008837.2-201ENST00000513076 418 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN1BQ07699 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN1BQ07699 SLC2A13P1-201ENST00000531560 322 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN1BQ07699 AL132657.2-201ENST00000564417 358 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.77□□□□□ -1.81
SCN1BQ07699 AC079171.1-201ENST00000568788 914 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 RPL23AP87-202ENST00000573039 466 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN1BQ07699 MIR4270-201ENST00000581799 70 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 MAGOH2P-202ENST00000584384 429 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC245036.5-201ENST00000596330 847 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN1BQ07699 AL021707.7-201ENST00000607991 416 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC006023.2-201ENST00000609916 167 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 AC012531.5-201ENST00000611375 151 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 AL133243.1-201ENST00000614487 366 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN1BQ07699 MIR1322-201ENST00000638013 71 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SCN1BQ07699 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SCN1BQ07699 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN1BQ07699 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
SCN1BQ07699 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN1BQ07699 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN1BQ07699 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN1BQ07699 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SCN1BQ07699 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SCN1BQ07699 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN1BQ07699 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
SCN1BQ07699 OR11H4-201ENST00000315409 1082 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms