Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AGGF1P8-201ENST00000562979 1000 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC006362.1-201ENST00000567392 174 ntBASIC4.12□□□□□ -1.75
CDH12P55289 CYP4A43P-201ENST00000568156 121 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH12P55289 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH12P55289 AL133338.2-201ENST00000604292 736 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC243773.3-201ENST00000613270 256 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AL133243.1-201ENST00000614487 366 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC231657.1-201ENST00000624313 397 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC006927.3-201ENST00000638789 384 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC009229.4-201ENST00000623854 1947 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AL133243.3-201ENST00000617415 3004 ntBASIC4.12□□□□□ -1.75
CDH12P55289 CPHL1P-201ENST00000461341 3407 ntBASIC4.12□□□□□ -1.75
CDH12P55289 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH12P55289 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH12P55289 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH12P55289 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDH12P55289 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CDH12P55289 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH12P55289 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDH12P55289 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.11□□□□□ -1.75
CDH12P55289 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDH12P55289 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 AL121657.1-201ENST00000327215 531 ntBASIC4.11□□□□□ -1.75
CDH12P55289 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDH12P55289 MIR649-201ENST00000384843 97 ntBASIC4.11□□□□□ -1.75
CDH12P55289 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 RN7SKP142-201ENST00000411236 328 ntBASIC4.11□□□□□ -1.75
CDH12P55289 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
CDH12P55289 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC004690.1-201ENST00000418216 328 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 CYCSP46-201ENST00000423569 204 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH12P55289 AC023347.2-201ENST00000433994 462 ntBASIC4.11□□□□□ -1.75
CDH12P55289 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH12P55289 AC096638.2-201ENST00000434965 711 ntBASIC4.11□□□□□ -1.75
CDH12P55289 UBE2FP3-201ENST00000436366 524 ntBASIC4.11□□□□□ -1.75
CDH12P55289 RPL23AP93-201ENST00000440847 484 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH12P55289 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDH12P55289 VN1R10P-201ENST00000447106 875 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 RPL39P6-201ENST00000448289 150 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC079804.1-201ENST00000461922 436 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC010301.1-201ENST00000473936 355 ntBASIC4.11□□□□□ -1.75
CDH12P55289 RPS4XP15-201ENST00000489210 795 ntBASIC4.11□□□□□ -1.75
CDH12P55289 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH12P55289 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH12P55289 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 AC004069.2-201ENST00000505438 1114 ntBASIC4.11□□□□□ -1.75
CDH12P55289 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH12P55289 MTCO2P32-201ENST00000514865 403 ntBASIC4.11□□□□□ -1.75
CDH12P55289 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 OR4A12P-201ENST00000530847 918 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 RFPL1S-203ENST00000539579 330 ntBASIC4.11□□□□□ -1.75
CDH12P55289 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 AC016180.1-201ENST00000567945 403 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC136618.2-201ENST00000575091 400 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AP005119.2-201ENST00000579735 1105 ntBASIC4.11□□□□□ -1.75
CDH12P55289 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH12P55289 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH12P55289 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 AL031666.3-201ENST00000609320 1006 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC008121.2-201ENST00000614647 523 ntBASIC4.11□□□□□ -1.75
CDH12P55289 LINC00901.1-201ENST00000617252 152 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC009878.1-201ENST00000621819 340 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AC092656.1-203ENST00000624134 423 ntBASIC4.11□□□□□ -1.75
CDH12P55289 AL356596.1-201ENST00000624230 379 ntBASIC4.11□□□□□ -1.75
CDH12P55289 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CDH12P55289 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH12P55289 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH12P55289 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH12P55289 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms