Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL121834.1-202ENST00000404494 277 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 HDGFP1-201ENST00000405943 252 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 Z75741.2-201ENST00000417272 1167 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.43□□□□□ -1.86
HCFC1P51610 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.43□□□□□ -1.86
HCFC1P51610 RBMY1KP-201ENST00000423480 476 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AL353748.1-201ENST00000440753 474 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 RPS17P13-201ENST00000448974 407 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 RPL7P48-201ENST00000461513 746 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.43□□□□□ -1.86
HCFC1P51610 HSPD1P15-201ENST00000505573 1122 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.43□□□□□ -1.86
HCFC1P51610 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.43□□□□□ -1.86
HCFC1P51610 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.43□□□□□ -1.86
HCFC1P51610 AC008083.2-201ENST00000546707 476 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.43□□□□□ -1.86
HCFC1P51610 DUXAP6-201ENST00000553858 601 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC009097.3-201ENST00000563557 1018 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.43□□□□□ -1.86
HCFC1P51610 MIR4666A-201ENST00000580160 79 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC005412.1-201ENST00000580812 1049 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
HCFC1P51610 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.43□□□□□ -1.86
HCFC1P51610 AC009220.3-201ENST00000604318 586 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC021749.1-201ENST00000604322 607 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC092954.1-201ENST00000609121 445 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC015813.4-201ENST00000610469 179 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 AC243312.2-201ENST00000623340 601 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HCFC1P51610 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HCFC1P51610 AC104454.1-201ENST00000421341 1401 ntBASIC3.43□□□□□ -1.86
HCFC1P51610 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.42□□□□□ -1.86
HCFC1P51610 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 RNF6P1-201ENST00000444889 1784 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HCFC1P51610 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 AP002001.2-201ENST00000529025 1469 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 MTND4P31-201ENST00000425607 1343 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.42□□□□□ -1.86
HCFC1P51610 AC011266.1-201ENST00000624119 3569 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 HMGB1P5-201ENST00000255320 642 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 AC245052.5-201ENST00000416320 649 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.42□□□□□ -1.86
HCFC1P51610 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 TXNL1P1-201ENST00000429528 554 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AL365396.1-201ENST00000430854 671 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 PPIAP3-201ENST00000450588 505 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 VN1R40P-201ENST00000455196 941 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 AC037198.2-201ENST00000478845 733 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 MYL12AP1-201ENST00000518490 515 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.42□□□□□ -1.86
HCFC1P51610 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.42□□□□□ -1.86
HCFC1P51610 BNIP3P4-201ENST00000604946 565 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AC009237.15-201ENST00000610252 501 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 VN1R74P-201ENST00000613259 503 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 AC078883.4-201ENST00000623218 367 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.42□□□□□ -1.86
HCFC1P51610 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HCFC1P51610 AL445437.1-201ENST00000623157 3087 ntBASIC3.42□□□□□ -1.86
HCFC1P51610 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
HCFC1P51610 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HCFC1P51610 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HCFC1P51610 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
HCFC1P51610 OR5H2-201ENST00000355273 945 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HCFC1P51610 RNU6-1339P-201ENST00000363574 91 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 RNU6-317P-201ENST00000384031 107 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 MIR491-201ENST00000384877 84 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC007066.1-201ENST00000392902 381 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.41□□□□□ -1.86
HCFC1P51610 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 MTND6P18-201ENST00000439477 513 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 RANP8-201ENST00000444720 713 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 CASP3P1-201ENST00000446037 609 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 AL133244.1-201ENST00000456007 258 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 RPL21P71-201ENST00000465598 459 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 RPL23AP12-201ENST00000467573 473 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 MTND3P7-201ENST00000474435 343 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 MTCO3P28-201ENST00000513351 515 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.41□□□□□ -1.86
HCFC1P51610 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.41□□□□□ -1.86
HCFC1P51610 DEFB109D-201ENST00000529497 240 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms