Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.06□□□□□ -1.76
LHX1P48742 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.06□□□□□ -1.76
LHX1P48742 OR10R1P-201ENST00000441524 1141 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.06□□□□□ -1.76
LHX1P48742 HMGB1P16-201ENST00000447155 540 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC112492.1-201ENST00000449607 712 ntBASIC4.06□□□□□ -1.76
LHX1P48742 NF1P3-201ENST00000457709 450 ntBASIC4.06□□□□□ -1.76
LHX1P48742 RPL7P15-201ENST00000461190 712 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AL133162.1-201ENST00000463228 453 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC018635.1-201ENST00000468292 1030 ntBASIC4.06□□□□□ -1.76
LHX1P48742 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.06□□□□□ -1.76
LHX1P48742 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX1P48742 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
LHX1P48742 OR4C2P-201ENST00000530855 1064 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.06□□□□□ -1.76
LHX1P48742 MIR5187-201ENST00000583479 76 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC113194.1-201ENST00000606037 500 ntBASIC4.06□□□□□ -1.76
LHX1P48742 RNU4-5P-201ENST00000607255 135 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AP003392.5-201ENST00000607857 415 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AP006248.2-201ENST00000623309 592 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC068620.4-201ENST00000636730 1182 ntBASIC4.06□□□□□ -1.76
LHX1P48742 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX1P48742 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX1P48742 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX1P48742 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.06□□□□□ -1.76
LHX1P48742 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
LHX1P48742 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX1P48742 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LHX1P48742 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.05□□□□□ -1.76
LHX1P48742 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX1P48742 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX1P48742 SNORD74.4-201ENST00000364129 80 ntBASIC4.05□□□□□ -1.76
LHX1P48742 MIR93-201ENST00000385024 80 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AL139098.1-201ENST00000407291 389 ntBASIC4.05□□□□□ -1.76
LHX1P48742 SNORA11-201ENST00000408789 128 ntBASIC4.05□□□□□ -1.76
LHX1P48742 RNA5SP306-201ENST00000411087 107 ntBASIC4.05□□□□□ -1.76
LHX1P48742 MTATP6P20-201ENST00000414147 562 ntBASIC4.05□□□□□ -1.76
LHX1P48742 OR4K6P-201ENST00000416478 897 ntBASIC4.05□□□□□ -1.76
LHX1P48742 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 RPP40P1-201ENST00000426762 456 ntBASIC4.05□□□□□ -1.76
LHX1P48742 RPL36P19-201ENST00000430744 301 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC087650.1-201ENST00000431445 468 ntBASIC4.05□□□□□ -1.76
LHX1P48742 ATP5HP2-201ENST00000433885 485 ntBASIC4.05□□□□□ -1.76
LHX1P48742 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.05□□□□□ -1.76
LHX1P48742 Z95327.1-201ENST00000446082 482 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC239367.2-201ENST00000447309 705 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AL500522.2-201ENST00000448562 343 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 RNU6-885P-201ENST00000516607 104 ntBASIC4.05□□□□□ -1.76
LHX1P48742 PAICSP4-201ENST00000517543 1253 ntBASIC4.05□□□□□ -1.76
LHX1P48742 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.05□□□□□ -1.76
LHX1P48742 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 AL132857.1-201ENST00000555180 708 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.05□□□□□ -1.76
LHX1P48742 MIR4504-201ENST00000577413 92 ntBASIC4.05□□□□□ -1.76
LHX1P48742 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LHX1P48742 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX1P48742 AL121895.2-201ENST00000619558 447 ntBASIC4.05□□□□□ -1.76
LHX1P48742 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LHX1P48742 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AL157770.1-201ENST00000623049 439 ntBASIC4.05□□□□□ -1.76
LHX1P48742 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.05□□□□□ -1.76
LHX1P48742 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX1P48742 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.05□□□□□ -1.76
LHX1P48742 AL139811.1-201ENST00000424779 2299 ntBASIC4.05□□□□□ -1.76
LHX1P48742 MAPK10-373ENST00000641983 6772 ntBASIC4.05□□□□□ -1.76
LHX1P48742 DBF4P1-201ENST00000412976 1892 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC074029.4-201ENST00000624796 1859 ntBASIC4.05□□□□□ -1.76
LHX1P48742 AC024560.2-201ENST00000507981 1497 ntBASIC4.05□□□□□ -1.76
LHX1P48742 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LHX1P48742 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LHX1P48742 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LHX1P48742 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LHX1P48742 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.04□□□□□ -1.76
LHX1P48742 DCAF13P3-201ENST00000561147 1334 ntBASIC4.04□□□□□ -1.76
LHX1P48742 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 RNU6-582P-201ENST00000362989 107 ntBASIC4.04□□□□□ -1.76
LHX1P48742 Y_RNA.472-201ENST00000384322 102 ntBASIC4.04□□□□□ -1.76
LHX1P48742 PTMAP2-201ENST00000397627 327 ntBASIC4.04□□□□□ -1.76
LHX1P48742 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.04□□□□□ -1.76
LHX1P48742 AC092648.1-201ENST00000425870 423 ntBASIC4.04□□□□□ -1.76
LHX1P48742 DPRXP1-201ENST00000426312 460 ntBASIC4.04□□□□□ -1.76
LHX1P48742 AC008065.1-201ENST00000428525 348 ntBASIC4.04□□□□□ -1.76
LHX1P48742 AC018644.1-201ENST00000429934 551 ntBASIC4.04□□□□□ -1.76
LHX1P48742 UBE2V1P1-201ENST00000430836 445 ntBASIC4.04□□□□□ -1.76
LHX1P48742 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.04□□□□□ -1.76
LHX1P48742 USP9YP24-201ENST00000434374 697 ntBASIC4.04□□□□□ -1.76
LHX1P48742 RPS26P56-201ENST00000444468 240 ntBASIC4.04□□□□□ -1.76
LHX1P48742 USP9YP17-201ENST00000444617 696 ntBASIC4.04□□□□□ -1.76
LHX1P48742 AL133547.1-201ENST00000448546 220 ntBASIC4.04□□□□□ -1.76
LHX1P48742 HMGN3P1-201ENST00000453847 193 ntBASIC4.04□□□□□ -1.76
LHX1P48742 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms