Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC105137.1-201ENST00000484355 562 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AC026979.1-201ENST00000492525 396 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.03□□□□□ -1.76
HNF4AP41235 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 AC109471.1-201ENST00000511631 612 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 SNORA31.9-201ENST00000516429 84 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 RN7SKP265-201ENST00000516448 223 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 ARL2BPP5-201ENST00000523141 481 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 AC105233.3-201ENST00000531125 744 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.03□□□□□ -1.76
HNF4AP41235 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.03□□□□□ -1.76
HNF4AP41235 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 MIR3939-201ENST00000582614 106 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 AL160237.3-201ENST00000604114 1013 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 AL031985.3-201ENST00000565390 2449 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 DBF4P1-201ENST00000412976 1892 ntBASIC4.03□□□□□ -1.77
HNF4AP41235 AC005261.4-201ENST00000600047 1385 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.02□□□□□ -1.77
HNF4AP41235 AC000367.1-201ENST00000452711 1766 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 OR4A15-201ENST00000314706 1035 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RNA5SP366-201ENST00000365454 123 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RNU6-761P-201ENST00000384148 107 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 OR6C69P-201ENST00000394268 893 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AL161909.1-201ENST00000397390 712 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RN7SKP182-201ENST00000410772 298 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RNU4-78P-201ENST00000410940 126 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 SSR1P2-201ENST00000415208 787 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 CRYBB2P1-203ENST00000415709 538 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.02□□□□□ -1.77
HNF4AP41235 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.02□□□□□ -1.77
HNF4AP41235 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.02□□□□□ -1.77
HNF4AP41235 AC092647.1-201ENST00000420654 287 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RPL21P66-201ENST00000426566 466 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 VDAC1P6-201ENST00000430062 855 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 COX6B1P7-201ENST00000430845 235 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 VDAC1P3-201ENST00000434069 851 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.02□□□□□ -1.77
HNF4AP41235 GSTA7P-201ENST00000438425 448 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 MTCO1P53-201ENST00000441633 699 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 HMGB1P16-201ENST00000447155 540 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 NUTF2P3-201ENST00000448540 384 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 TRBV26-201ENST00000456572 344 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RNA5SP246-201ENST00000458909 119 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 UQCRHP4-201ENST00000471686 272 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AC091860.1-201ENST00000505723 432 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.02□□□□□ -1.77
HNF4AP41235 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RNA5SP135-201ENST00000517019 125 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 RNU6-1073P-201ENST00000517182 106 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.02□□□□□ -1.77
HNF4AP41235 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.02□□□□□ -1.77
HNF4AP41235 AC109635.4-202ENST00000531666 412 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 CYCSP29-201ENST00000533731 318 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.02□□□□□ -1.77
HNF4AP41235 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.02□□□□□ -1.77
HNF4AP41235 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.02□□□□□ -1.77
HNF4AP41235 AC068313.1-201ENST00000604028 1008 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AC103710.3-201ENST00000608157 948 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 AC093673.2-201ENST00000609674 331 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HNF4AP41235 AC006963.1-201ENST00000624003 1052 ntBASIC4.02□□□□□ -1.77
HNF4AP41235 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HNF4AP41235 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HNF4AP41235 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HNF4AP41235 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HNF4AP41235 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.01□□□□□ -1.77
HNF4AP41235 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HNF4AP41235 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HNF4AP41235 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HNF4AP41235 MAPK10-253ENST00000641010 4072 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HNF4AP41235 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 LINC02471-203ENST00000641941 4752 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HNF4AP41235 AL603865.2-201ENST00000401679 213 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms