Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPHP41219 HMGB1P12-201ENST00000438594 598 ntBASIC4.03□□□□□ -1.76
PRPHP41219 MTCYBP31-201ENST00000438855 1122 ntBASIC4.03□□□□□ -1.76
PRPHP41219 ELOCP3-201ENST00000439303 348 ntBASIC4.03□□□□□ -1.76
PRPHP41219 UBE2V1P5-201ENST00000440070 405 ntBASIC4.03□□□□□ -1.76
PRPHP41219 AC007000.2-201ENST00000442564 487 ntBASIC4.03□□□□□ -1.76
PRPHP41219 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPHP41219 RPL6P5-201ENST00000445678 828 ntBASIC4.03□□□□□ -1.76
PRPHP41219 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPHP41219 AC233982.1-201ENST00000451247 436 ntBASIC4.03□□□□□ -1.76
PRPHP41219 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPHP41219 AC008280.2-201ENST00000455473 307 ntBASIC4.03□□□□□ -1.76
PRPHP41219 RPS4XP13-201ENST00000483219 789 ntBASIC4.03□□□□□ -1.76
PRPHP41219 HMGB3P15-201ENST00000507326 574 ntBASIC4.03□□□□□ -1.76
PRPHP41219 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPHP41219 AC103833.1-201ENST00000517442 172 ntBASIC4.03□□□□□ -1.76
PRPHP41219 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPHP41219 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPHP41219 AC233266.2-201ENST00000567067 528 ntBASIC4.03□□□□□ -1.76
PRPHP41219 AC010735.1-201ENST00000567305 1026 ntBASIC4.03□□□□□ -1.76
PRPHP41219 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPHP41219 RNVU1-4-201ENST00000612985 164 ntBASIC4.03□□□□□ -1.76
PRPHP41219 MIR8058-201ENST00000615737 89 ntBASIC4.03□□□□□ -1.76
PRPHP41219 AL356490.1-201ENST00000623079 479 ntBASIC4.03□□□□□ -1.76
PRPHP41219 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPHP41219 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPHP41219 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPHP41219 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPHP41219 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PRPHP41219 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPHP41219 ENSAP3-201ENST00000312710 333 ntBASIC4.02□□□□□ -1.77
PRPHP41219 RNU6-1243P-201ENST00000364028 107 ntBASIC4.02□□□□□ -1.77
PRPHP41219 MTND4P22-201ENST00000413116 1169 ntBASIC4.02□□□□□ -1.77
PRPHP41219 PNRC2P1-201ENST00000423940 420 ntBASIC4.02□□□□□ -1.77
PRPHP41219 UBE2V1P1-201ENST00000430836 445 ntBASIC4.02□□□□□ -1.77
PRPHP41219 MTCO1P43-201ENST00000431831 488 ntBASIC4.02□□□□□ -1.77
PRPHP41219 AL662791.1-201ENST00000441992 928 ntBASIC4.02□□□□□ -1.77
PRPHP41219 AC007967.1-201ENST00000455422 1159 ntBASIC4.02□□□□□ -1.77
PRPHP41219 AC010468.1-201ENST00000461022 817 ntBASIC4.02□□□□□ -1.77
PRPHP41219 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPHP41219 ACTR3P3-201ENST00000480448 893 ntBASIC4.02□□□□□ -1.77
PRPHP41219 RPL23AP44-201ENST00000482216 473 ntBASIC4.02□□□□□ -1.77
PRPHP41219 ACTG1P13-201ENST00000486987 1043 ntBASIC4.02□□□□□ -1.77
PRPHP41219 AC005726.1-201ENST00000494679 427 ntBASIC4.02□□□□□ -1.77
PRPHP41219 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPHP41219 AC026784.1-201ENST00000507986 352 ntBASIC4.02□□□□□ -1.77
PRPHP41219 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPHP41219 MTND4LP31-201ENST00000514859 294 ntBASIC4.02□□□□□ -1.77
PRPHP41219 RN7SKP18-201ENST00000516005 275 ntBASIC4.02□□□□□ -1.77
PRPHP41219 RNU1-95P-201ENST00000516357 160 ntBASIC4.02□□□□□ -1.77
PRPHP41219 RNU1-128P-201ENST00000516704 160 ntBASIC4.02□□□□□ -1.77
PRPHP41219 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPHP41219 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPHP41219 AC027104.1-201ENST00000563702 681 ntBASIC4.02□□□□□ -1.77
PRPHP41219 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPHP41219 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPHP41219 AC008687.2-201ENST00000597865 520 ntBASIC4.02□□□□□ -1.77
PRPHP41219 SNRPGP15-201ENST00000600149 222 ntBASIC4.02□□□□□ -1.77
PRPHP41219 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPHP41219 OR2BH1P-201ENST00000608850 864 ntBASIC4.02□□□□□ -1.77
PRPHP41219 MIR1264-201ENST00000616374 69 ntBASIC4.02□□□□□ -1.77
PRPHP41219 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPHP41219 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PRPHP41219 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
PRPHP41219 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PRPHP41219 AC107081.3-201ENST00000612715 2034 ntBASIC4.02□□□□□ -1.77
PRPHP41219 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPHP41219 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPHP41219 PWAR6-201ENST00000552334 4618 ntBASIC4.02□□□□□ -1.77
PRPHP41219 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPHP41219 RNA5SP124-201ENST00000362739 110 ntBASIC4.01□□□□□ -1.77
PRPHP41219 RNA5SP235-201ENST00000365411 114 ntBASIC4.01□□□□□ -1.77
PRPHP41219 DSTNP4-201ENST00000399472 474 ntBASIC4.01□□□□□ -1.77
PRPHP41219 AL356967.1-201ENST00000406305 431 ntBASIC4.01□□□□□ -1.77
PRPHP41219 RNU6ATAC-201ENST00000408749 126 ntBASIC4.01□□□□□ -1.77
PRPHP41219 RN7SKP202-201ENST00000410439 330 ntBASIC4.01□□□□□ -1.77
PRPHP41219 SYF2P2-201ENST00000417620 583 ntBASIC4.01□□□□□ -1.77
PRPHP41219 RPL36AP36-201ENST00000418616 301 ntBASIC4.01□□□□□ -1.77
PRPHP41219 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPHP41219 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPHP41219 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPHP41219 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPHP41219 VN1R17P-201ENST00000472048 1090 ntBASIC4.01□□□□□ -1.77
PRPHP41219 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPHP41219 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPHP41219 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPHP41219 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPHP41219 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.01□□□□□ -1.77
PRPHP41219 RN7SKP244-201ENST00000516513 307 ntBASIC4.01□□□□□ -1.77
PRPHP41219 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPHP41219 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPHP41219 AC026333.2-201ENST00000542164 106 ntBASIC4.01□□□□□ -1.77
PRPHP41219 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPHP41219 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPHP41219 DUXAP6-201ENST00000553858 601 ntBASIC4.01□□□□□ -1.77
PRPHP41219 GTF2IP22-201ENST00000554443 182 ntBASIC4.01□□□□□ -1.77
PRPHP41219 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPHP41219 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPHP41219 MIR4504-201ENST00000577413 92 ntBASIC4.01□□□□□ -1.77
PRPHP41219 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms