Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.04□□□□□ -1.6
COL15A1P39059 MTND5P31-201ENST00000419366 1374 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL15A1P39059 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL15A1P39059 HMGB1P5-201ENST00000255320 642 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 RNU6-304P-201ENST00000364855 107 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL15A1P39059 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL15A1P39059 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL15A1P39059 TAF9BP1-201ENST00000396646 746 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 GSTA8P-201ENST00000404253 637 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.04□□□□□ -1.6
COL15A1P39059 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.04□□□□□ -1.6
COL15A1P39059 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.04□□□□□ -1.6
COL15A1P39059 EIF4EP1-201ENST00000422311 642 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 DPRXP1-201ENST00000426312 460 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 RPL7P4-203ENST00000430239 730 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 UBE2V1P1-201ENST00000430836 445 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 HMGN2P31-201ENST00000432430 273 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.04□□□□□ -1.6
COL15A1P39059 GTF2IP7-202ENST00000436677 309 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.04□□□□□ -1.6
COL15A1P39059 FABP3P2-201ENST00000453169 399 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL15A1P39059 AL133477.1-201ENST00000457472 514 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.04□□□□□ -1.6
COL15A1P39059 SOD1P3-201ENST00000518682 454 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 IGKV2-36-201ENST00000519999 223 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AC087369.1-201ENST00000520775 996 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.04□□□□□ -1.6
COL15A1P39059 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.04□□□□□ -1.6
COL15A1P39059 MIR4666A-201ENST00000580160 79 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.04□□□□□ -1.6
COL15A1P39059 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.04□□□□□ -1.6
COL15A1P39059 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL15A1P39059 AC104662.1-201ENST00000604448 511 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AL049634.3-201ENST00000604968 457 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AC018638.7-201ENST00000605836 1114 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AL391497.1-201ENST00000608671 547 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AC084782.3-201ENST00000612282 578 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL15A1P39059 AP000676.3-201ENST00000623299 569 ntBASIC5.04□□□□□ -1.6
COL15A1P39059 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.04□□□□□ -1.6
COL15A1P39059 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COL15A1P39059 AL513185.3-201ENST00000433335 1300 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL15A1P39059 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL15A1P39059 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL15A1P39059 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.03□□□□□ -1.6
COL15A1P39059 Y_RNA.192-201ENST00000363977 102 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 RNU6-560P-201ENST00000364007 108 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 RNA5SP97-201ENST00000365006 84 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
COL15A1P39059 MIR16-1-201ENST00000385271 89 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 ATP5F1P4-201ENST00000397288 746 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 SKINT1L-201ENST00000401057 817 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.03□□□□□ -1.6
COL15A1P39059 PTP4A1P5-201ENST00000420305 455 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC092647.1-201ENST00000420654 287 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC090960.1-201ENST00000421072 306 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC007435.1-201ENST00000421086 415 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.03□□□□□ -1.6
COL15A1P39059 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.03□□□□□ -1.6
COL15A1P39059 MTCO3P21-201ENST00000430791 643 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.03□□□□□ -1.6
COL15A1P39059 AC092809.1-201ENST00000441469 474 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.03□□□□□ -1.6
COL15A1P39059 YWHAQP9-201ENST00000445891 512 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.03□□□□□ -1.6
COL15A1P39059 snoU13.24-201ENST00000458998 104 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 RPL23AP71-201ENST00000470966 469 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 UBE2CP3-201ENST00000502715 450 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 DYNLL1P6-201ENST00000503440 264 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 COX6B1P6-201ENST00000522347 255 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.03□□□□□ -1.6
COL15A1P39059 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.03□□□□□ -1.6
COL15A1P39059 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL15A1P39059 AL442163.2-201ENST00000553912 710 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC008015.1-201ENST00000555505 465 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC068714.1-201ENST00000559623 800 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC109446.2-201ENST00000567872 497 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.03□□□□□ -1.6
COL15A1P39059 AC012417.1-201ENST00000582307 1039 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AP005262.1-201ENST00000582646 997 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.03□□□□□ -1.6
COL15A1P39059 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.03□□□□□ -1.6
COL15A1P39059 AL031281.1-201ENST00000604049 488 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC096577.2-201ENST00000611455 153 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC121761.2-201ENST00000617300 689 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AL603755.1-201ENST00000619504 163 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 AC004943.3-201ENST00000624116 600 ntBASIC5.03□□□□□ -1.6
COL15A1P39059 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COL15A1P39059 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 AC096656.1-201ENST00000623826 1364 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms