Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A4P31645 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC6A4P31645 AC209154.1-201ENST00000582156 337 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC6A4P31645 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC6A4P31645 PRELID3BP8-201ENST00000604148 295 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 ELOCP34-201ENST00000604436 327 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC090186.1-201ENST00000605991 572 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 AC078899.5-201ENST00000612475 178 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC108479.2-201ENST00000617314 601 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC015914.2-201ENST00000618167 288 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AP001005.3-201ENST00000622049 129 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC6A4P31645 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 AC009229.4-201ENST00000623854 1947 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC6A4P31645 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 AC097504.1-201ENST00000515103 2415 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC000374.1-201ENST00000434698 1745 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SLC6A4P31645 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC6A4P31645 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SLC6A4P31645 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 DHX40P1-201ENST00000588725 1412 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AL731532.2-201ENST00000623542 1953 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 DCAF13P1-201ENST00000495256 1330 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 Y_RNA.41-201ENST00000362646 102 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 SNORD113.2-201ENST00000364166 89 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 RNU5E-5P-201ENST00000365379 116 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 RNU6-657P-201ENST00000383904 107 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 RPS3AP23-201ENST00000401762 784 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 VN1R8P-201ENST00000407739 893 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 RN7SKP267-201ENST00000410381 285 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 HMGN1P14-201ENST00000412459 517 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC6A4P31645 IPMKP1-201ENST00000425988 855 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC6A4P31645 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC6A4P31645 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC6A4P31645 MTND3P21-201ENST00000433774 331 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 EEF1E1P1-201ENST00000446998 430 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 VN1R10P-201ENST00000447106 875 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 NPM1P49-201ENST00000448027 714 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 ARPC3P5-201ENST00000448802 534 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC6A4P31645 AC009963.2-201ENST00000453431 138 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 OR52A4P-201ENST00000472867 958 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 AC106872.3-201ENST00000495104 446 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC111000.3-201ENST00000508057 576 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 POU5F1P7-201ENST00000508759 541 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC6A4P31645 RNU6-150P-201ENST00000516237 95 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 ZNF519P2-201ENST00000557032 169 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC6A4P31645 HSPE1P3-201ENST00000559254 309 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC093591.2-201ENST00000565254 3843 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC141257.3-201ENST00000572906 215 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC6A4P31645 MIR548AB-201ENST00000584917 84 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC123786.2-201ENST00000603459 275 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AC123768.4-201ENST00000616244 701 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 AL122125.1-201ENST00000616999 600 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SLC6A4P31645 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC6A4P31645 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC6A4P31645 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC6A4P31645 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
SLC6A4P31645 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC6A4P31645 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC6A4P31645 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC6A4P31645 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms