Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC243756.2-201ENST00000618406 463 ntBASIC4.47□□□□□ -1.69
HOXA11P31270 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.47□□□□□ -1.69
HOXA11P31270 AC073530.2-201ENST00000623987 261 ntBASIC4.47□□□□□ -1.69
HOXA11P31270 AC067931.1-201ENST00000624190 671 ntBASIC4.47□□□□□ -1.69
HOXA11P31270 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA11P31270 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
HOXA11P31270 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HOXA11P31270 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA11P31270 SGO1P2-201ENST00000429458 1589 ntBASIC4.47□□□□□ -1.69
HOXA11P31270 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HOXA11P31270 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA11P31270 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA11P31270 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA11P31270 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA11P31270 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.46□□□□□ -1.69
HOXA11P31270 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HOXA11P31270 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA11P31270 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA11P31270 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXA11P31270 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA11P31270 RNU6-543P-201ENST00000362576 108 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA11P31270 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA11P31270 RNU6-648P-201ENST00000410190 107 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 RNA5SP239-201ENST00000410218 129 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA11P31270 RPS12P23-201ENST00000419579 400 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXA11P31270 AC011233.1-201ENST00000422812 283 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA11P31270 AL593851.1-201ENST00000426171 157 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA11P31270 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA11P31270 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA11P31270 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA11P31270 TBCAP1-201ENST00000436520 327 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA11P31270 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA11P31270 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA11P31270 AC011979.1-201ENST00000472300 483 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 VN1R105P-201ENST00000486595 910 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA11P31270 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA11P31270 AC010460.1-201ENST00000507087 466 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA11P31270 snoZ278.1-201ENST00000517059 112 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 RNU6-232P-201ENST00000517144 64 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA11P31270 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA11P31270 AADACP1-206ENST00000561502 1193 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA11P31270 MIR4666A-201ENST00000580160 79 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 MIR5684-201ENST00000585074 65 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 AP000811.1-201ENST00000603803 651 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 AC098679.5-201ENST00000624394 571 ntBASIC4.46□□□□□ -1.7
HOXA11P31270 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA11P31270 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXA11P31270 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA11P31270 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA11P31270 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA11P31270 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXA11P31270 FAM91A3P-201ENST00000456826 2544 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 AC000367.1-201ENST00000452711 1766 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 NSRP1P1-201ENST00000444067 1693 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA11P31270 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA11P31270 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA11P31270 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA11P31270 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA11P31270 NACA3P-201ENST00000359690 648 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 Y_RNA.194-201ENST00000363985 102 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 RNU6-553P-201ENST00000364047 96 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 snoZ40.1-201ENST00000364540 72 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 RNU6-192P-201ENST00000391253 100 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA11P31270 RNU4-6P-201ENST00000410804 122 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 TCEA1P4-201ENST00000415066 844 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 RPS3AP44-201ENST00000425466 790 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 OR5AW1P-201ENST00000426334 1006 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 PRELID3BP10-201ENST00000431957 584 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA11P31270 AL353706.1-201ENST00000436728 494 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 RPL7P29-201ENST00000437151 728 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 RPS4XP4-201ENST00000443195 763 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 MTCYBP3-201ENST00000445588 1137 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 AC009961.3-201ENST00000449832 765 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA11P31270 RNU7-125P-201ENST00000458760 62 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 AC091959.2-201ENST00000477363 321 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 AC012170.1-201ENST00000495139 359 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA11P31270 AC020593.1-201ENST00000507399 299 ntBASIC4.45□□□□□ -1.7
HOXA11P31270 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HOXA11P31270 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA11P31270 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA11P31270 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXA11P31270 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA11P31270 PTP4A1P6-201ENST00000531034 478 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms