Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC107081.3-201ENST00000612715 2034 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 SNORA73.1-201ENST00000363107 205 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 RNU6-921P-201ENST00000384361 107 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 RNU6-769P-201ENST00000384407 104 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTPN1P18031 FGF7P8-201ENST00000402994 292 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC013429.2-201ENST00000418798 781 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 MTND4P28-201ENST00000426217 387 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 TIMM9P3-201ENST00000428659 274 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC093414.1-201ENST00000434712 514 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AL451074.3-201ENST00000437709 472 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AL512326.1-201ENST00000443050 721 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 CYCSP24-201ENST00000445119 316 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 MTND3P10-201ENST00000450967 341 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 BTF3P5-201ENST00000457252 467 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC012170.1-201ENST00000495139 359 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC117522.1-201ENST00000509821 380 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 Y_RNA.702-201ENST00000516843 96 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 OR5AQ1P-201ENST00000527596 927 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.23□□□□□ -1.57
PTPN1P18031 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 HSPE1P3-201ENST00000559254 309 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 MIR3682-201ENST00000581338 84 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 MIR4480-201ENST00000582492 71 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 TPMTP1-201ENST00000592307 737 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AL031320.1-201ENST00000604177 357 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AL590282.1-201ENST00000610379 1136 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 AC074140.1-201ENST00000621617 208 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 AC110994.2-201ENST00000635481 492 ntBASIC5.23□□□□□ -1.57
PTPN1P18031 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN1P18031 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.23□□□□□ -1.57
PTPN1P18031 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN1P18031 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN1P18031 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN1P18031 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN1P18031 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTPN1P18031 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTPN1P18031 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN1P18031 SAMMSON-226ENST00000642089 1582 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN1P18031 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
PTPN1P18031 PCAT14-202ENST00000627127 3935 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 OR4K15-201ENST00000305051 1216 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN1P18031 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTPN1P18031 SNORA72.1-201ENST00000363485 129 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 RNY4P14-201ENST00000363656 96 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 RN7SKP103-201ENST00000363848 320 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 RNU1-85P-201ENST00000364127 164 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 AL357515.1-201ENST00000402967 542 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 CTSL3P-202ENST00000412179 788 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 TBCAP2-201ENST00000416175 326 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN1P18031 AC069157.1-201ENST00000421749 137 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 AC009961.2-201ENST00000435771 251 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 YWHAZP8-201ENST00000436935 731 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN1P18031 SNRPEP8-201ENST00000442866 260 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN1P18031 MTCO3P2-201ENST00000457365 171 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 MTCO1P42-201ENST00000457379 726 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN1P18031 AC092324.1-201ENST00000468671 324 ntBASIC5.22□□□□□ -1.57
PTPN1P18031 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN1P18031 RPL7AP10-201ENST00000481016 791 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms