Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.25□□□□□ -1.73
PCNAP12004 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.25□□□□□ -1.73
PCNAP12004 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.25□□□□□ -1.73
PCNAP12004 AC107982.3-201ENST00000584957 985 ntBASIC4.25□□□□□ -1.73
PCNAP12004 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.25□□□□□ -1.73
PCNAP12004 Z99497.2-201ENST00000603634 310 ntBASIC4.25□□□□□ -1.73
PCNAP12004 AC072039.2-201ENST00000608883 439 ntBASIC4.25□□□□□ -1.73
PCNAP12004 AC116651.1-201ENST00000609724 556 ntBASIC4.25□□□□□ -1.73
PCNAP12004 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.25□□□□□ -1.73
PCNAP12004 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.25□□□□□ -1.73
PCNAP12004 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.25□□□□□ -1.73
PCNAP12004 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.25□□□□□ -1.73
PCNAP12004 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.25□□□□□ -1.73
PCNAP12004 AC007671.2-201ENST00000637344 619 ntBASIC4.25□□□□□ -1.73
PCNAP12004 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCNAP12004 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCNAP12004 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCNAP12004 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.25□□□□□ -1.73
PCNAP12004 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
PCNAP12004 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCNAP12004 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PCNAP12004 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCNAP12004 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
PCNAP12004 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCNAP12004 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCNAP12004 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.24□□□□□ -1.73
PCNAP12004 DHX40P1-201ENST00000588725 1412 ntBASIC4.24□□□□□ -1.73
PCNAP12004 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PCNAP12004 AL391994.1-201ENST00000254724 282 ntBASIC4.24□□□□□ -1.73
PCNAP12004 RNU6-216P-201ENST00000363282 104 ntBASIC4.24□□□□□ -1.73
PCNAP12004 RNU6-931P-201ENST00000363850 107 ntBASIC4.24□□□□□ -1.73
PCNAP12004 SNORA4.1-201ENST00000364263 144 ntBASIC4.24□□□□□ -1.73
PCNAP12004 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PCNAP12004 RPL23AP29-201ENST00000397284 453 ntBASIC4.24□□□□□ -1.73
PCNAP12004 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCNAP12004 AC004987.3-201ENST00000413879 771 ntBASIC4.24□□□□□ -1.73
PCNAP12004 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 NUP35P2-201ENST00000416748 943 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.24□□□□□ -1.73
PCNAP12004 AL391219.1-201ENST00000422570 483 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AL022400.1-201ENST00000423946 935 ntBASIC4.24□□□□□ -1.73
PCNAP12004 SDCBPP2-201ENST00000424643 885 ntBASIC4.24□□□□□ -1.73
PCNAP12004 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.24□□□□□ -1.73
PCNAP12004 RSL24D1P3-201ENST00000449255 495 ntBASIC4.24□□□□□ -1.73
PCNAP12004 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.24□□□□□ -1.73
PCNAP12004 SLC31A1P1-201ENST00000451221 567 ntBASIC4.24□□□□□ -1.73
PCNAP12004 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.24□□□□□ -1.73
PCNAP12004 AL122001.1-201ENST00000457027 370 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.24□□□□□ -1.73
PCNAP12004 MTND2P28-201ENST00000457540 1044 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 AC087879.1-201ENST00000474343 374 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.24□□□□□ -1.73
PCNAP12004 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.24□□□□□ -1.73
PCNAP12004 AC117522.2-201ENST00000510049 657 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AC093281.2-201ENST00000510153 597 ntBASIC4.24□□□□□ -1.73
PCNAP12004 Y_RNA.688-201ENST00000516565 95 ntBASIC4.24□□□□□ -1.73
PCNAP12004 IGLVIV-65-201ENST00000517313 360 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.24□□□□□ -1.73
PCNAP12004 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 ARL2BPP5-201ENST00000523141 481 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AC091515.1-201ENST00000548110 679 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AL389895.1-201ENST00000554127 252 ntBASIC4.24□□□□□ -1.73
PCNAP12004 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.24□□□□□ -1.73
PCNAP12004 MTCYBP28-201ENST00000566728 1132 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AC135628.1-201ENST00000568867 534 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.24□□□□□ -1.73
PCNAP12004 Z94722.1-201ENST00000604328 474 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AC245297.2-201ENST00000610119 565 ntBASIC4.24□□□□□ -1.73
PCNAP12004 AL603755.1-201ENST00000619504 163 ntBASIC4.24□□□□□ -1.73
PCNAP12004 MIR3974-201ENST00000637126 96 ntBASIC4.24□□□□□ -1.73
PCNAP12004 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 AL031985.3-201ENST00000565390 2449 ntBASIC4.24□□□□□ -1.73
PCNAP12004 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.24□□□□□ -1.73
PCNAP12004 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCNAP12004 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCNAP12004 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCNAP12004 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.23□□□□□ -1.73
PCNAP12004 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.23□□□□□ -1.73
PCNAP12004 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCNAP12004 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PCNAP12004 RAD17P1-201ENST00000418130 2042 ntBASIC4.23□□□□□ -1.73
PCNAP12004 MTND5P24-201ENST00000438892 1767 ntBASIC4.23□□□□□ -1.73
PCNAP12004 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCNAP12004 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCNAP12004 AC079741.1-201ENST00000321498 212 ntBASIC4.23□□□□□ -1.73
PCNAP12004 SNRPEP3-201ENST00000338402 276 ntBASIC4.23□□□□□ -1.73
PCNAP12004 RNA5SP505-201ENST00000364748 108 ntBASIC4.23□□□□□ -1.73
PCNAP12004 MIR649-201ENST00000384843 97 ntBASIC4.23□□□□□ -1.73
PCNAP12004 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PCNAP12004 MIR1284-201ENST00000408337 120 ntBASIC4.23□□□□□ -1.73
PCNAP12004 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCNAP12004 MIR1911-201ENST00000410783 80 ntBASIC4.23□□□□□ -1.73
PCNAP12004 AC119751.6-201ENST00000416712 186 ntBASIC4.23□□□□□ -1.73
PCNAP12004 TIMM9P2-201ENST00000419324 266 ntBASIC4.23□□□□□ -1.73
PCNAP12004 RPEP3-201ENST00000425462 676 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms