Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.92□□□□□ -1.62
TOP2AP11388 AC017037.2-201ENST00000513850 890 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 IGKV2D-23-201ENST00000518179 286 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AC018690.1-201ENST00000608144 626 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 TUG1_1.1-201ENST00000610654 145 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AL590808.1-201ENST00000618696 141 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.92□□□□□ -1.62
TOP2AP11388 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.92□□□□□ -1.62
TOP2AP11388 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.92□□□□□ -1.62
TOP2AP11388 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TOP2AP11388 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.92□□□□□ -1.62
TOP2AP11388 AL356057.3-201ENST00000402607 340 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 Z98941.1-201ENST00000407764 100 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.92□□□□□ -1.62
TOP2AP11388 RPS26P40-201ENST00000435209 294 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AC113430.1-201ENST00000506872 718 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 RNA5SP282-201ENST00000516355 108 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AC079089.3-201ENST00000603094 673 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AL451049.1-201ENST00000608672 497 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TOP2AP11388 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TOP2AP11388 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TOP2AP11388 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TOP2AP11388 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.91□□□□□ -1.62
TOP2AP11388 RPL23AP22-201ENST00000437556 453 ntBASIC4.91□□□□□ -1.62
TOP2AP11388 RPS6P2-201ENST00000454208 705 ntBASIC4.91□□□□□ -1.62
TOP2AP11388 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.91□□□□□ -1.62
TOP2AP11388 MIR6817-201ENST00000615588 66 ntBASIC4.91□□□□□ -1.62
TOP2AP11388 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.91□□□□□ -1.62
TOP2AP11388 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.91□□□□□ -1.62
TOP2AP11388 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.91□□□□□ -1.62
TOP2AP11388 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TOP2AP11388 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.9□□□□□ -1.62
TOP2AP11388 TAB3P1-202ENST00000452645 1634 ntBASIC4.9□□□□□ -1.62
TOP2AP11388 AC021755.1-201ENST00000559747 1447 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 U3.6-201ENST00000363622 211 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 GCNT6-201ENST00000379591 934 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TOP2AP11388 RNA5SP274-201ENST00000410484 108 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.9□□□□□ -1.63
TOP2AP11388 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TOP2AP11388 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.9□□□□□ -1.63
TOP2AP11388 AC104984.5-201ENST00000586878 94 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 AC104763.2-201ENST00000604179 382 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 AL592295.2-201ENST00000612578 206 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TOP2AP11388 AC073869.7-201ENST00000640874 297 ntBASIC4.9□□□□□ -1.63
TOP2AP11388 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TOP2AP11388 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TOP2AP11388 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.89□□□□□ -1.63
TOP2AP11388 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.89□□□□□ -1.63
TOP2AP11388 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TOP2AP11388 AC015911.5-201ENST00000587076 451 ntBASIC4.89□□□□□ -1.63
TOP2AP11388 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.89□□□□□ -1.63
TOP2AP11388 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.89□□□□□ -1.63
TOP2AP11388 AC006111.3-201ENST00000622137 383 ntBASIC4.89□□□□□ -1.63
TOP2AP11388 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TOP2AP11388 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TOP2AP11388 AP006437.1-201ENST00000641440 3685 ntBASIC4.89□□□□□ -1.63
TOP2AP11388 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TOP2AP11388 AC004801.2-202ENST00000463559 283 ntBASIC4.88□□□□□ -1.63
TOP2AP11388 RPS6P4-201ENST00000494693 758 ntBASIC4.88□□□□□ -1.63
TOP2AP11388 SNORA31.21-201ENST00000517180 77 ntBASIC4.88□□□□□ -1.63
TOP2AP11388 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.88□□□□□ -1.63
TOP2AP11388 AC136601.2-201ENST00000604356 474 ntBASIC4.88□□□□□ -1.63
TOP2AP11388 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.88□□□□□ -1.63
TOP2AP11388 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TOP2AP11388 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.88□□□□□ -1.63
TOP2AP11388 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TOP2AP11388 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TOP2AP11388 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP2AP11388 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.87□□□□□ -1.63
TOP2AP11388 EEF1B2P7-201ENST00000451177 676 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 AC006445.2-201ENST00000510061 472 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 AC008549.1-201ENST00000512900 643 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 AC026790.2-201ENST00000606282 430 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TOP2AP11388 MIR196B-201ENST00000384852 84 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP2AP11388 AC009963.1-201ENST00000417265 157 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.87□□□□□ -1.63
TOP2AP11388 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP2AP11388 AL513043.1-201ENST00000439124 535 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.87□□□□□ -1.63
TOP2AP11388 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 AC027176.1-201ENST00000560204 514 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.87□□□□□ -1.63
TOP2AP11388 AL158196.1-201ENST00000616786 434 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 SPATA2P1-201ENST00000431223 2055 ntBASIC4.87□□□□□ -1.63
TOP2AP11388 ASNSP3-201ENST00000451989 1306 ntBASIC4.86□□□□□ -1.63
TOP2AP11388 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TOP2AP11388 RSL24D1P4-201ENST00000400938 484 ntBASIC4.86□□□□□ -1.63
TOP2AP11388 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.86□□□□□ -1.63
TOP2AP11388 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.86□□□□□ -1.63
TOP2AP11388 AC245054.2-201ENST00000415639 319 ntBASIC4.86□□□□□ -1.63
TOP2AP11388 UQCRHP3-201ENST00000451503 251 ntBASIC4.86□□□□□ -1.63
TOP2AP11388 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
TOP2AP11388 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.86□□□□□ -1.63
TOP2AP11388 CYCSP20-201ENST00000473154 315 ntBASIC4.86□□□□□ -1.63
TOP2AP11388 AC087241.4-201ENST00000612441 480 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms