Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC172P0C7W6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 SNORA7.2-201ENST00000364446 145 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 RN7SKP111-201ENST00000410349 271 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 RNA5SP31-201ENST00000411144 127 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 NOTCH2P1-201ENST00000443481 624 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 SNORA70.17-201ENST00000516449 133 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AC092354.2-201ENST00000607786 514 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AL590240.3-201ENST00000621416 943 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 U4.6-201ENST00000621618 127 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AC002546.1-201ENST00000588041 2504 ntBASIC3.71□□□□□ -1.82
CCDC172P0C7W6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC172P0C7W6 AL161912.2-201ENST00000565707 3007 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 RPL21P17-201ENST00000397467 475 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 CRYBB2P1-203ENST00000415709 538 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC245291.1-201ENST00000419501 328 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 BX890604.2-201ENST00000427883 474 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 CYCSP4-201ENST00000429682 331 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 CKS1BP5-201ENST00000434172 273 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 RPS15AP1-201ENST00000457423 391 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 RPL7P15-201ENST00000461190 712 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 RPL21P18-201ENST00000469899 480 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC103987.1-201ENST00000473394 348 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 SUMO1P1-201ENST00000497904 306 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 KCTD9P5-201ENST00000504141 1170 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 MTND2P26-201ENST00000528255 1029 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC004024.1-201ENST00000549244 247 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC006023.2-201ENST00000609916 167 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC024941.1-201ENST00000612250 334 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 AC016717.3-201ENST00000624730 554 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 MIR4496-201ENST00000635896 61 ntBASIC3.7□□□□□ -1.82
CCDC172P0C7W6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC172P0C7W6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 SNORD3H-201ENST00000384486 214 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 RN7SKP159-201ENST00000410657 292 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 FAR1P1-201ENST00000427163 934 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AC093151.1-201ENST00000427711 313 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 SETP8-201ENST00000435341 628 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 RRM2P4-201ENST00000441721 562 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AC073387.1-201ENST00000453261 709 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 RPL21P104-201ENST00000464143 478 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AC007536.1-201ENST00000533382 349 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 POLR2KP1-201ENST00000553226 168 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AL157394.1-201ENST00000562983 1224 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AC245128.3-201ENST00000594721 748 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AL357559.1-201ENST00000622228 274 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 FAM157B-203ENST00000639350 358 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 AC103988.1-201ENST00000566382 2177 ntBASIC3.69□□□□□ -1.82
CCDC172P0C7W6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC172P0C7W6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 RNA5SP383-201ENST00000362934 120 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms