Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC6P09630 Z75741.2-201ENST00000417272 1167 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AC027644.1-201ENST00000419595 298 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC6P09630 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC6P09630 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC6P09630 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC6P09630 MTCO2P7-201ENST00000446518 666 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AC104306.1-201ENST00000449702 371 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC6P09630 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC6P09630 RPL21P11-201ENST00000461458 483 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AC021146.8-201ENST00000507455 733 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 PRELID3BP4-201ENST00000515476 571 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC6P09630 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC6P09630 AC103987.3-201ENST00000582071 292 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC6P09630 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC6P09630 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC6P09630 AC096577.2-201ENST00000611455 153 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AL592148.2-201ENST00000612210 372 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AC107075.1-201ENST00000613695 314 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AC105227.2-201ENST00000615075 605 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC6P09630 AF001550.2-201ENST00000636643 217 ntBASIC4.49□□□□□ -1.69
HOXC6P09630 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXC6P09630 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXC6P09630 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 AC000367.1-201ENST00000452711 1766 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 AC073055.1-201ENST00000456901 1621 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 AC007066.1-201ENST00000392902 381 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 MIR1251-201ENST00000408552 70 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 VTA1P1-201ENST00000414044 866 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXC6P09630 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC6P09630 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC6P09630 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC6P09630 AL365203.2-201ENST00000423444 196 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC091390.3-201ENST00000426478 338 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AL591419.1-201ENST00000427423 339 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 RPL23AP4-201ENST00000427757 463 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 OR4F13P-201ENST00000428478 931 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 AC096638.2-201ENST00000434965 711 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 HMGB1P45-201ENST00000435986 653 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC6P09630 RPS26P30-201ENST00000443431 335 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 RPS3AP12-201ENST00000443616 753 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC6P09630 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 snoU13.24-201ENST00000458998 104 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC6P09630 MTND4P2-201ENST00000507767 1203 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC113347.3-201ENST00000509113 148 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC110768.1-201ENST00000509222 400 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 OR5BM1P-201ENST00000512021 366 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 RNA5SP164-201ENST00000516533 110 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 IGKV2D-19-201ENST00000523346 262 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC6P09630 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 ELOCP32-201ENST00000548625 324 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 GTF2IP22-201ENST00000554443 182 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC095057.3-201ENST00000567102 1157 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 ATP5F1P7-201ENST00000567330 760 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 MTCO1P40-201ENST00000574371 625 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 MIR5708-201ENST00000579723 85 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 AC119751.7-201ENST00000600494 245 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC021749.1-201ENST00000604322 607 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC105129.3-201ENST00000605455 485 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AL031666.3-201ENST00000609320 1006 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC013562.2-201ENST00000611632 603 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AL356274.1-201ENST00000617064 410 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC091953.5-201ENST00000622919 233 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 AC007342.8-201ENST00000623278 678 ntBASIC4.48□□□□□ -1.69
HOXC6P09630 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC6P09630 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms