Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A2P05997 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A2P05997 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A2P05997 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.22□□□□□ -1.73
COL5A2P05997 AL672296.1-201ENST00000427780 2158 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
COL5A2P05997 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A2P05997 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
COL5A2P05997 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A2P05997 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A2P05997 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A2P05997 AC062016.1-201ENST00000355719 319 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 AF228730.1-201ENST00000397972 663 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 RN7SKP220-201ENST00000410611 288 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A2P05997 EEF1A1P41-201ENST00000414667 207 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 ELOCP23-201ENST00000452014 332 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 RPL23AP67-201ENST00000465341 474 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 AC068724.1-201ENST00000487100 792 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL5A2P05997 SNORA70.19-201ENST00000516717 90 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 AC009812.2-201ENST00000517657 457 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 VTA1P2-201ENST00000520205 911 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A2P05997 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.21□□□□□ -1.74
COL5A2P05997 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A2P05997 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A2P05997 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.21□□□□□ -1.74
COL5A2P05997 MTATP6P2-201ENST00000603319 678 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 AC013244.3-201ENST00000605614 388 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A2P05997 CR589904.2-201ENST00000612533 440 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 AL590410.1-201ENST00000617925 333 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A2P05997 NCAPGP1-201ENST00000505112 1814 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A2P05997 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A2P05997 AF117829.1-206ENST00000621883 3802 ntBASIC4.21□□□□□ -1.74
COL5A2P05997 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A2P05997 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A2P05997 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A2P05997 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.2□□□□□ -1.74
COL5A2P05997 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A2P05997 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A2P05997 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.2□□□□□ -1.74
COL5A2P05997 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.2□□□□□ -1.74
COL5A2P05997 SKP1P1-201ENST00000438081 489 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 AC105272.1-201ENST00000438604 198 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 AC069540.1-201ENST00000446320 988 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 RPL7P59-201ENST00000447700 943 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.2□□□□□ -1.74
COL5A2P05997 AC010468.3-201ENST00000508225 458 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.2□□□□□ -1.74
COL5A2P05997 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
COL5A2P05997 AC107934.2-201ENST00000518653 310 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.2□□□□□ -1.74
COL5A2P05997 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A2P05997 AL139395.1-201ENST00000603662 160 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.2□□□□□ -1.74
COL5A2P05997 AL121652.1-201ENST00000608851 448 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 AL163051.2-201ENST00000618976 735 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 AP000943.4-201ENST00000622912 357 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 AC099654.9-201ENST00000637055 678 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 MIR622-201ENST00000638396 96 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
COL5A2P05997 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.2□□□□□ -1.74
COL5A2P05997 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.2□□□□□ -1.74
COL5A2P05997 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL5A2P05997 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL5A2P05997 RNU6-1000P-201ENST00000391066 106 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 SSR1P2-201ENST00000415208 787 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.19□□□□□ -1.74
COL5A2P05997 OR2X1P-201ENST00000421144 687 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AL139281.1-201ENST00000422120 335 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A2P05997 NANOGP6-201ENST00000429190 847 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A2P05997 AC016696.1-201ENST00000446949 318 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A2P05997 AC108729.2-201ENST00000476543 840 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 OR9N1P-201ENST00000491296 333 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 FCF1P3-201ENST00000496394 590 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AC096571.1-202ENST00000506634 735 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.19□□□□□ -1.74
COL5A2P05997 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.19□□□□□ -1.74
COL5A2P05997 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.19□□□□□ -1.74
COL5A2P05997 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL5A2P05997 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.19□□□□□ -1.74
COL5A2P05997 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.19□□□□□ -1.74
COL5A2P05997 AL137072.1-201ENST00000603444 466 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AC140725.3-201ENST00000616193 880 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AC074276.2-201ENST00000619891 348 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AC099506.2-201ENST00000623074 221 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 AP003485.2-201ENST00000623636 610 ntBASIC4.19□□□□□ -1.74
COL5A2P05997 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.19□□□□□ -1.74
COL5A2P05997 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.19□□□□□ -1.74
COL5A2P05997 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A2P05997 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A2P05997 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms