Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC009414.1-201ENST00000427200 443 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 AL139415.2-201ENST00000431968 163 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 AC069499.1-201ENST00000489433 509 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.72□□□□□ -1.97
SPTA1P02549 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.72□□□□□ -1.97
SPTA1P02549 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.72□□□□□ -1.97
SPTA1P02549 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.72□□□□□ -1.97
SPTA1P02549 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.72□□□□□ -1.97
SPTA1P02549 AC092184.1-201ENST00000625042 715 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 OR4G2P-202ENST00000641004 1759 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SPTA1P02549 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SPTA1P02549 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SPTA1P02549 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SPTA1P02549 RNA5SP68-201ENST00000363885 119 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 RPS26P47-201ENST00000427219 348 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.72□□□□□ -1.97
SPTA1P02549 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SPTA1P02549 RPL37P4-201ENST00000448908 268 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 SNORD109B-201ENST00000458961 67 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 SNORD109A-201ENST00000459128 67 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 RPS26P3-201ENST00000470205 348 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.72□□□□□ -1.97
SPTA1P02549 AC004057.1-201ENST00000485827 348 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 AC108729.3-201ENST00000513484 108 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 AC004832.5-201ENST00000608677 401 ntBASIC2.72□□□□□ -1.97
SPTA1P02549 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.72□□□□□ -1.97
SPTA1P02549 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
SPTA1P02549 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
SPTA1P02549 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
SPTA1P02549 SNORD67-201ENST00000390833 111 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SPTA1P02549 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.71□□□□□ -1.98
SPTA1P02549 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.71□□□□□ -1.98
SPTA1P02549 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.71□□□□□ -1.98
SPTA1P02549 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.71□□□□□ -1.98
SPTA1P02549 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.71□□□□□ -1.98
SPTA1P02549 HMGN2P47-201ENST00000559378 272 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 AC099489.2-201ENST00000574976 260 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 ZNF72P-201ENST00000425869 1908 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SPTA1P02549 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SPTA1P02549 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.71□□□□□ -1.98
SPTA1P02549 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SPTA1P02549 U3.42-201ENST00000408746 214 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.71□□□□□ -1.98
SPTA1P02549 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.71□□□□□ -1.98
SPTA1P02549 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.71□□□□□ -1.98
SPTA1P02549 TRBV8-2-201ENST00000475637 270 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.71□□□□□ -1.98
SPTA1P02549 AC015917.1-201ENST00000579654 510 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SPTA1P02549 NCAPGP1-201ENST00000505112 1814 ntBASIC2.71□□□□□ -1.98
SPTA1P02549 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SPTA1P02549 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SPTA1P02549 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
SPTA1P02549 SNORA71.1-201ENST00000364523 117 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 Y_RNA.338-201ENST00000365320 114 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SPTA1P02549 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.7□□□□□ -1.98
SPTA1P02549 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 AC111000.2-201ENST00000507775 550 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.7□□□□□ -1.98
SPTA1P02549 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.7□□□□□ -1.98
SPTA1P02549 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SPTA1P02549 AC025034.2-201ENST00000623264 286 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SPTA1P02549 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SPTA1P02549 CR381670.1-201ENST00000624291 1693 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SPTA1P02549 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SPTA1P02549 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SPTA1P02549 RPS3AP26-201ENST00000398259 784 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 AL590290.1-201ENST00000405336 380 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 RNU4-53P-201ENST00000410828 140 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 RANP4-201ENST00000413361 655 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SPTA1P02549 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.7□□□□□ -1.98
SPTA1P02549 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.7□□□□□ -1.98
SPTA1P02549 AC006989.1-201ENST00000427212 131 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.7□□□□□ -1.98
SPTA1P02549 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.7□□□□□ -1.98
SPTA1P02549 AC010468.1-201ENST00000461022 817 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 RN7SL499P-201ENST00000481141 276 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.7□□□□□ -1.98
SPTA1P02549 AC055855.1-201ENST00000489563 579 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 BTF3L4P4-201ENST00000506381 449 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.7□□□□□ -1.98
SPTA1P02549 AL139395.1-201ENST00000603662 160 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 AC022509.4-201ENST00000621404 572 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.7□□□□□ -1.98
SPTA1P02549 AL596275.2-204ENST00000641628 552 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 AL596275.2-206ENST00000641957 626 ntBASIC2.7□□□□□ -1.98
SPTA1P02549 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SPTA1P02549 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.69□□□□□ -1.98
SPTA1P02549 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.69□□□□□ -1.98
SPTA1P02549 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SPTA1P02549 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.69□□□□□ -1.98
SPTA1P02549 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms