Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC124856.1-201ENST00000600819 896 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC079089.3-201ENST00000603094 673 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.43□□□□□ -1.86
COL4A1P02462 TTC39DP-201ENST00000416781 1688 ntBASIC3.42□□□□□ -1.86
COL4A1P02462 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL4A1P02462 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.42□□□□□ -1.86
COL4A1P02462 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
COL4A1P02462 AC104687.1-201ENST00000485829 412 ntBASIC3.42□□□□□ -1.86
COL4A1P02462 AC114967.1-201ENST00000504890 259 ntBASIC3.42□□□□□ -1.86
COL4A1P02462 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.42□□□□□ -1.86
COL4A1P02462 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.42□□□□□ -1.86
COL4A1P02462 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.42□□□□□ -1.86
COL4A1P02462 AP000919.1-202ENST00000581139 1264 ntBASIC3.42□□□□□ -1.86
COL4A1P02462 AC000123.3-201ENST00000624029 4975 ntBASIC3.42□□□□□ -1.86
COL4A1P02462 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL4A1P02462 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.42□□□□□ -1.86
COL4A1P02462 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL4A1P02462 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
COL4A1P02462 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL4A1P02462 RNA5SP289-201ENST00000362332 137 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 RNU6-249P-201ENST00000363016 102 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL4A1P02462 RNA5SP296-201ENST00000410523 111 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 AC002524.1-201ENST00000411687 547 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 PPIAP17-201ENST00000438507 471 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.41□□□□□ -1.86
COL4A1P02462 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.41□□□□□ -1.86
COL4A1P02462 RN7SL75P-201ENST00000461926 281 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 AC105918.1-201ENST00000474399 838 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.41□□□□□ -1.86
COL4A1P02462 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.41□□□□□ -1.86
COL4A1P02462 AC104763.2-201ENST00000604179 382 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.41□□□□□ -1.86
COL4A1P02462 AL359757.2-201ENST00000624309 274 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
COL4A1P02462 AC093831.2-201ENST00000624393 3427 ntBASIC3.41□□□□□ -1.86
COL4A1P02462 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL4A1P02462 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.4□□□□□ -1.86
COL4A1P02462 RNU1-35P-201ENST00000362782 153 ntBASIC3.4□□□□□ -1.86
COL4A1P02462 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.86
COL4A1P02462 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.4□□□□□ -1.86
COL4A1P02462 Z93242.1-201ENST00000427102 353 ntBASIC3.4□□□□□ -1.86
COL4A1P02462 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.4□□□□□ -1.86
COL4A1P02462 AL035407.1-201ENST00000429211 571 ntBASIC3.4□□□□□ -1.86
COL4A1P02462 AC006539.3-201ENST00000454258 129 ntBASIC3.4□□□□□ -1.86
COL4A1P02462 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.4□□□□□ -1.86
COL4A1P02462 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL4A1P02462 AC104984.5-201ENST00000586878 94 ntBASIC3.4□□□□□ -1.86
COL4A1P02462 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.4□□□□□ -1.86
COL4A1P02462 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COL4A1P02462 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL4A1P02462 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL4A1P02462 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.4□□□□□ -1.87
COL4A1P02462 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.87
COL4A1P02462 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL4A1P02462 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.39□□□□□ -1.87
COL4A1P02462 RN7SKP58-201ENST00000411010 305 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 OR6C64P-201ENST00000419708 825 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 OR2AS1P-201ENST00000427827 319 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 AC112220.1-201ENST00000434628 355 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 CACYBPP2-201ENST00000453625 678 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.39□□□□□ -1.87
COL4A1P02462 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
COL4A1P02462 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.39□□□□□ -1.87
COL4A1P02462 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.39□□□□□ -1.87
COL4A1P02462 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A1P02462 U7.8-201ENST00000619968 63 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A1P02462 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
COL4A1P02462 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 DDX18P3-201ENST00000404856 2007 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 AL672167.1-206ENST00000356293 943 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 RN7SKP285-201ENST00000410137 318 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 RNA5SP107-201ENST00000411358 122 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.39□□□□□ -1.87
COL4A1P02462 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.39□□□□□ -1.87
COL4A1P02462 RPL7L1P1-201ENST00000448259 785 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 UQCRHP3-201ENST00000451503 251 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 SUMO2P4-201ENST00000504193 276 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 AC117522.3-201ENST00000507974 584 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.39□□□□□ -1.87
COL4A1P02462 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A1P02462 AC009039.2-201ENST00000624524 529 ntBASIC3.39□□□□□ -1.87
COL4A1P02462 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A1P02462 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms