Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.6□□□□□ -1.83
COL1A1P02452 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 MTCO1P8-201ENST00000416914 1523 ntBASIC3.59□□□□□ -1.83
COL1A1P02452 AL592494.2-201ENST00000425455 1548 ntBASIC3.59□□□□□ -1.83
COL1A1P02452 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.59□□□□□ -1.83
COL1A1P02452 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL1A1P02452 AL359693.1-201ENST00000614959 2407 ntBASIC3.59□□□□□ -1.83
COL1A1P02452 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.59□□□□□ -1.84
COL1A1P02452 RPS4XP8-201ENST00000402039 771 ntBASIC3.59□□□□□ -1.84
COL1A1P02452 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.59□□□□□ -1.84
COL1A1P02452 AC006960.1-201ENST00000419980 153 ntBASIC3.59□□□□□ -1.84
COL1A1P02452 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.59□□□□□ -1.84
COL1A1P02452 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.59□□□□□ -1.84
COL1A1P02452 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.59□□□□□ -1.84
COL1A1P02452 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.59□□□□□ -1.84
COL1A1P02452 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.59□□□□□ -1.84
COL1A1P02452 AC007566.2-201ENST00000603642 413 ntBASIC3.59□□□□□ -1.84
COL1A1P02452 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.59□□□□□ -1.84
COL1A1P02452 AC107027.3-201ENST00000565095 3473 ntBASIC3.59□□□□□ -1.84
COL1A1P02452 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL1A1P02452 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL1A1P02452 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.58□□□□□ -1.84
COL1A1P02452 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL1A1P02452 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.58□□□□□ -1.84
COL1A1P02452 AC013470.3-201ENST00000420252 1194 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.58□□□□□ -1.84
COL1A1P02452 AC019097.1-201ENST00000424783 735 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 OR2AS1P-201ENST00000427827 319 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 HMGB3P6-201ENST00000444896 598 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 AL109933.2-201ENST00000452651 260 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 ST13P14-201ENST00000474095 734 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.58□□□□□ -1.84
COL1A1P02452 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.58□□□□□ -1.84
COL1A1P02452 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.58□□□□□ -1.84
COL1A1P02452 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL1A1P02452 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.58□□□□□ -1.84
COL1A1P02452 AC078899.5-201ENST00000612475 178 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 AC019080.5-201ENST00000624891 757 ntBASIC3.58□□□□□ -1.84
COL1A1P02452 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
COL1A1P02452 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL1A1P02452 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL1A1P02452 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
COL1A1P02452 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
COL1A1P02452 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.57□□□□□ -1.84
COL1A1P02452 OR52B1P-201ENST00000316506 909 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 SNORA9.2-201ENST00000365361 133 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.57□□□□□ -1.84
COL1A1P02452 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.57□□□□□ -1.84
COL1A1P02452 NPM1P13-201ENST00000452663 865 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 AC239798.3-201ENST00000454459 408 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 RN7SL442P-201ENST00000473804 320 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 HMGB1P3-201ENST00000502802 616 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 AC093755.1-201ENST00000512950 1023 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.57□□□□□ -1.84
COL1A1P02452 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.57□□□□□ -1.84
COL1A1P02452 VN1R90P-201ENST00000595717 726 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 AC024153.1-201ENST00000603103 365 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 AC110741.2-201ENST00000605278 268 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
COL1A1P02452 AC245100.2-201ENST00000454544 1679 ntBASIC3.57□□□□□ -1.84
COL1A1P02452 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL1A1P02452 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL1A1P02452 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL1A1P02452 NPM1P24-201ENST00000428039 894 ntBASIC3.56□□□□□ -1.84
COL1A1P02452 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.56□□□□□ -1.84
COL1A1P02452 RNU7-157P-201ENST00000459600 66 ntBASIC3.56□□□□□ -1.84
COL1A1P02452 COX6CP8-201ENST00000522620 226 ntBASIC3.56□□□□□ -1.84
COL1A1P02452 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.56□□□□□ -1.84
COL1A1P02452 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.56□□□□□ -1.84
COL1A1P02452 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.56□□□□□ -1.84
COL1A1P02452 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.56□□□□□ -1.84
COL1A1P02452 AC022509.4-201ENST00000621404 572 ntBASIC3.56□□□□□ -1.84
COL1A1P02452 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.56□□□□□ -1.84
COL1A1P02452 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
COL1A1P02452 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL1A1P02452 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
COL1A1P02452 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL1A1P02452 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.56□□□□□ -1.84
COL1A1P02452 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL1A1P02452 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL1A1P02452 RNU1-87P-201ENST00000363727 170 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 RNU6-805P-201ENST00000365643 106 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 RNA5SP107-201ENST00000411358 122 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL1A1P02452 AC022018.1-201ENST00000430685 241 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 AC010468.1-201ENST00000461022 817 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.55□□□□□ -1.84
COL1A1P02452 Y_RNA.673-201ENST00000516306 88 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 AP000919.1-202ENST00000581139 1264 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.55□□□□□ -1.84
COL1A1P02452 RPL23AP92-201ENST00000603609 255 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 AC007619.2-201ENST00000605743 379 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL1A1P02452 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
COL1A1P02452 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.55□□□□□ -1.84
COL1A1P02452 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
COL1A1P02452 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL1A1P02452 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms