Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RN7SL585P-201ENST00000470538 280 ntBASIC4.13□□□□□ -1.75
LDLRP01130 RPL30P11-201ENST00000495304 339 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.13□□□□□ -1.75
LDLRP01130 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.13□□□□□ -1.75
LDLRP01130 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.13□□□□□ -1.75
LDLRP01130 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.13□□□□□ -1.75
LDLRP01130 RNA5SP143-201ENST00000516936 115 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AC023632.4-201ENST00000517783 191 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.13□□□□□ -1.75
LDLRP01130 IGKV2-23-201ENST00000518729 323 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.13□□□□□ -1.75
LDLRP01130 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.13□□□□□ -1.75
LDLRP01130 OR4A2P-201ENST00000527276 913 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LDLRP01130 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.13□□□□□ -1.75
LDLRP01130 AC135001.1-201ENST00000544546 283 ntBASIC4.13□□□□□ -1.75
LDLRP01130 ZNF321P-202ENST00000550843 495 ntBASIC4.13□□□□□ -1.75
LDLRP01130 DUXAP6-201ENST00000553858 601 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.13□□□□□ -1.75
LDLRP01130 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.13□□□□□ -1.75
LDLRP01130 AP001269.3-201ENST00000588718 329 ntBASIC4.13□□□□□ -1.75
LDLRP01130 VN1R78P-201ENST00000597393 564 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AP003973.1-201ENST00000604639 691 ntBASIC4.13□□□□□ -1.75
LDLRP01130 AC013562.2-201ENST00000611632 603 ntBASIC4.13□□□□□ -1.75
LDLRP01130 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.13□□□□□ -1.75
LDLRP01130 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LDLRP01130 MIR3974-201ENST00000637126 96 ntBASIC4.13□□□□□ -1.75
LDLRP01130 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LDLRP01130 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.13□□□□□ -1.75
LDLRP01130 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.13□□□□□ -1.75
LDLRP01130 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.13□□□□□ -1.75
LDLRP01130 AC007529.1-201ENST00000418574 2178 ntBASIC4.13□□□□□ -1.75
LDLRP01130 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LDLRP01130 AC012020.1-201ENST00000624541 1728 ntBASIC4.12□□□□□ -1.75
LDLRP01130 ZNF876P-202ENST00000398732 1485 ntBASIC4.12□□□□□ -1.75
LDLRP01130 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 RNA5SP391-201ENST00000363456 119 ntBASIC4.12□□□□□ -1.75
LDLRP01130 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 RNU6-1151P-201ENST00000384684 107 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AL022722.2-201ENST00000402519 180 ntBASIC4.12□□□□□ -1.75
LDLRP01130 PPIAP31-201ENST00000405422 495 ntBASIC4.12□□□□□ -1.75
LDLRP01130 RNA5SP306-201ENST00000411087 107 ntBASIC4.12□□□□□ -1.75
LDLRP01130 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 AL031779.1-201ENST00000415663 330 ntBASIC4.12□□□□□ -1.75
LDLRP01130 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 RPS24P7-201ENST00000416921 246 ntBASIC4.12□□□□□ -1.75
LDLRP01130 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.12□□□□□ -1.75
LDLRP01130 MTND1P20-201ENST00000430341 950 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 AC011998.1-201ENST00000433403 117 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 SEPT7P5-201ENST00000434048 306 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AC093155.1-201ENST00000440164 826 ntBASIC4.12□□□□□ -1.75
LDLRP01130 HMGB1P48-201ENST00000446155 598 ntBASIC4.12□□□□□ -1.75
LDLRP01130 VN1R34P-201ENST00000447387 883 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AL358232.1-201ENST00000448030 501 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.12□□□□□ -1.75
LDLRP01130 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 RAP1BP2-201ENST00000478270 544 ntBASIC4.12□□□□□ -1.75
LDLRP01130 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.12□□□□□ -1.75
LDLRP01130 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 MTND4P2-201ENST00000507767 1203 ntBASIC4.12□□□□□ -1.75
LDLRP01130 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.12□□□□□ -1.75
LDLRP01130 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 SERPINE4P-201ENST00000554978 281 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AADACP1-206ENST00000561502 1193 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 AC061975.8-201ENST00000587058 721 ntBASIC4.12□□□□□ -1.75
LDLRP01130 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 AL353778.1-201ENST00000603149 408 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AL139286.1-201ENST00000604465 483 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AC007349.4-201ENST00000608114 532 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AC092106.3-201ENST00000611308 722 ntBASIC4.12□□□□□ -1.75
LDLRP01130 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 AL157770.1-201ENST00000623049 439 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.12□□□□□ -1.75
LDLRP01130 MIR3653-201ENST00000625572 110 ntBASIC4.12□□□□□ -1.75
LDLRP01130 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
LDLRP01130 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LDLRP01130 ZNF962P-201ENST00000443465 3140 ntBASIC4.12□□□□□ -1.75
LDLRP01130 AL356489.2-201ENST00000566968 3528 ntBASIC4.12□□□□□ -1.75
LDLRP01130 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDLRP01130 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.11□□□□□ -1.75
LDLRP01130 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDLRP01130 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.11□□□□□ -1.75
LDLRP01130 SNORA62.3-201ENST00000365110 153 ntBASIC4.11□□□□□ -1.75
LDLRP01130 RNA5SP366-201ENST00000365454 123 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms