Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNOT4O95628 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNOT4O95628 GNG5P1-201ENST00000255500 204 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RNU6-777P-201ENST00000364265 104 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RN7SKP6-201ENST00000364795 319 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CNOT4O95628 SNORD115.1-201ENST00000391109 76 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AL121972.1-201ENST00000402023 252 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 MIR1305-201ENST00000408300 86 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RN7SKP266-201ENST00000410232 287 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RSU1P3-201ENST00000412878 835 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 SDCBPP2-201ENST00000424643 885 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RPS27AP6-201ENST00000427962 448 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 RPL36P19-201ENST00000430744 301 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AC012075.1-201ENST00000436549 580 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 NDUFA5P4-201ENST00000436704 385 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RPL23AP16-201ENST00000441715 421 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 RPL23AP20-201ENST00000447965 421 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 BTF3P5-201ENST00000457252 467 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 MTCO1P42-201ENST00000457379 726 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RPL39P36-201ENST00000490784 156 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AC231760.1-201ENST00000498002 260 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 RNA5SP92-201ENST00000516437 110 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 HSPA8P13-201ENST00000523715 472 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 AP000790.1-201ENST00000528891 737 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 MRPS21P7-201ENST00000566937 238 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC010928.3-201ENST00000587712 541 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 TPMTP1-201ENST00000592307 737 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.94□□□□□ -1.62
CNOT4O95628 AC020910.2-201ENST00000603635 610 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 BCRP9-201ENST00000605312 388 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 Y_RNA.812-201ENST00000610788 101 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 Y_RNA.784-201ENST00000613803 101 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 Y_RNA.787-201ENST00000616522 101 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 Y_RNA.780-201ENST00000617336 101 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 RNA5SP439-201ENST00000617595 124 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 Y_RNA.801-201ENST00000619005 101 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 AC006504.8-201ENST00000621046 635 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CNOT4O95628 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CNOT4O95628 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 MTND5P28-201ENST00000438005 1594 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNOT4O95628 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNOT4O95628 AL139811.1-201ENST00000424779 2299 ntBASIC4.94□□□□□ -1.62
CNOT4O95628 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNOT4O95628 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.94□□□□□ -1.62
CNOT4O95628 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.94□□□□□ -1.62
CNOT4O95628 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CNOT4O95628 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
CNOT4O95628 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNOT4O95628 AC025125.1-201ENST00000624743 1922 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 OR4F13P-202ENST00000560066 2054 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.93□□□□□ -1.62
CNOT4O95628 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CNOT4O95628 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CNOT4O95628 RNU6-984P-201ENST00000363236 109 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 AL009179.1-201ENST00000406085 265 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 AL354751.2-201ENST00000415471 210 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 COX6CP17-201ENST00000421389 185 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 AC133104.1-201ENST00000429100 218 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC005534.2-201ENST00000431047 433 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 RPL31P35-201ENST00000431058 377 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 KCTD9P3-201ENST00000434597 1169 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms