Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MTCYBP28-201ENST00000566728 1132 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AC095057.3-201ENST00000567102 1157 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AC107982.3-201ENST00000584957 985 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.48□□□□□ -1.85
CLDN9O95484 AL391261.4-201ENST00000616012 481 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLDN9O95484 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CLDN9O95484 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CLDN9O95484 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN9O95484 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN9O95484 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CLDN9O95484 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 MTCO1P24-201ENST00000515438 1558 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.47□□□□□ -1.85
CLDN9O95484 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLDN9O95484 RNU6-481P-201ENST00000384194 107 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN9O95484 AL136116.1-201ENST00000403591 381 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AC073264.1-201ENST00000411508 416 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 CYCSP19-201ENST00000411715 316 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN9O95484 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLDN9O95484 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN9O95484 AC084357.1-201ENST00000473404 255 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 RPS27P23-201ENST00000487608 251 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AP002812.1-201ENST00000495378 474 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 RPL7P47-201ENST00000497299 556 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN9O95484 SAP18P1-201ENST00000512058 390 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 NPM1P41-201ENST00000512920 831 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 SCARNA13-201ENST00000516672 275 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 OR8K2P-201ENST00000524645 927 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.47□□□□□ -1.85
CLDN9O95484 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN9O95484 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 AC006130.2-201ENST00000586202 326 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 BNIP3P4-201ENST00000604946 565 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AL034351.1-201ENST00000605288 668 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AC005972.3-201ENST00000606304 481 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AC107308.1-201ENST00000615897 301 ntBASIC3.47□□□□□ -1.85
CLDN9O95484 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN9O95484 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.47□□□□□ -1.85
CLDN9O95484 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CLDN9O95484 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN9O95484 MTND5P28-201ENST00000438005 1594 ntBASIC3.46□□□□□ -1.85
CLDN9O95484 AC068647.1-201ENST00000489539 2265 ntBASIC3.46□□□□□ -1.85
CLDN9O95484 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN9O95484 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN9O95484 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN9O95484 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 MTND4P22-201ENST00000413116 1169 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 RPL30P2-201ENST00000414021 291 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC127526.1-201ENST00000417526 366 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN9O95484 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN9O95484 PTP4A1P5-201ENST00000420305 455 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 AL158071.1-201ENST00000430315 461 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AL445584.1-201ENST00000431451 330 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN9O95484 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 HMGB1P45-201ENST00000435986 653 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AL590762.3-201ENST00000436372 640 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CLDN9O95484 RAB11AP1-201ENST00000442978 646 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN9O95484 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 RPL9P32-201ENST00000464118 620 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 RPL7L1P8-201ENST00000469911 741 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC087879.1-201ENST00000474343 374 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 ACTG1P13-201ENST00000486987 1043 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN9O95484 AC078918.1-201ENST00000498515 228 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC026784.1-201ENST00000507986 352 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN9O95484 MTCO1P30-201ENST00000515244 580 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN9O95484 RNU2-58P-201ENST00000516403 183 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 RANP9-201ENST00000519957 271 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC087272.1-201ENST00000523624 533 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN9O95484 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN9O95484 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN9O95484 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.46□□□□□ -1.86
CLDN9O95484 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN9O95484 AC023824.3-201ENST00000569003 562 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.46□□□□□ -1.86
CLDN9O95484 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms