Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 U6atac.1-201ENST00000616025 117 ntBASIC4.42□□□□□ -1.7
CNOT3O75175 AC023509.5-201ENST00000617434 807 ntBASIC4.42□□□□□ -1.7
CNOT3O75175 AC022306.2-201ENST00000617563 647 ntBASIC4.42□□□□□ -1.7
CNOT3O75175 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.42□□□□□ -1.7
CNOT3O75175 AC015726.3-201ENST00000624501 418 ntBASIC4.42□□□□□ -1.7
CNOT3O75175 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT3O75175 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT3O75175 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CNOT3O75175 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT3O75175 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT3O75175 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CNOT3O75175 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNOT3O75175 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT3O75175 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 MAPK10-263ENST00000641052 4307 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 RNU6-839P-201ENST00000363347 108 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 RNU5F-7P-201ENST00000363696 115 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 RNU6-621P-201ENST00000364752 109 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 RNY3P10-201ENST00000384764 102 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 AL080315.1-201ENST00000406055 466 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 CDK8P2-201ENST00000415020 547 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC009480.2-201ENST00000422916 432 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AL732292.1-201ENST00000426692 226 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 C4BPAP2-201ENST00000428434 478 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 RPL7P4-203ENST00000430239 730 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 USP9YP29-201ENST00000445112 563 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 TDGF1P1-201ENST00000445734 527 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 BMI1P1-201ENST00000445879 941 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 ARL2BPP10-201ENST00000446487 531 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC243772.1-201ENST00000451620 410 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 MTCYBP1-201ENST00000454315 1119 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC011825.1-201ENST00000484967 388 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 ACTG1P13-201ENST00000486987 1043 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 RNA5SP497-201ENST00000516081 97 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 IGLVIV-53-201ENST00000520107 367 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AP001207.1-201ENST00000524051 481 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 OR5AK1P-201ENST00000524837 922 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AP002963.1-201ENST00000530590 184 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC068831.4-201ENST00000556118 109 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC012414.6-201ENST00000568241 401 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC083899.3-201ENST00000603413 594 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC093765.1-201ENST00000603758 881 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC091946.2-201ENST00000606105 291 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC083809.1-201ENST00000615051 472 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC025588.4-201ENST00000615802 908 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC073348.1-201ENST00000623002 331 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 ATE1-AS1-202ENST00000636460 506 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC068137.3-201ENST00000639191 341 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 AC073869.6-201ENST00000640656 341 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CNOT3O75175 AC139713.2-214ENST00000642059 1811 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 CASC19-284ENST00000642142 1868 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.41□□□□□ -1.7
CNOT3O75175 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNOT3O75175 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.4□□□□□ -1.7
CNOT3O75175 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.4□□□□□ -1.7
CNOT3O75175 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.4□□□□□ -1.7
CNOT3O75175 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.4□□□□□ -1.7
CNOT3O75175 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.4□□□□□ -1.7
CNOT3O75175 AC090971.4-201ENST00000560291 1800 ntBASIC4.4□□□□□ -1.7
CNOT3O75175 AL592148.3-201ENST00000608771 2646 ntBASIC4.4□□□□□ -1.7
CNOT3O75175 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNOT3O75175 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNOT3O75175 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CNOT3O75175 Y_RNA.6-201ENST00000362350 114 ntBASIC4.4□□□□□ -1.71
CNOT3O75175 RNU6-1066P-201ENST00000363573 105 ntBASIC4.4□□□□□ -1.71
CNOT3O75175 RNU6-660P-201ENST00000364566 109 ntBASIC4.4□□□□□ -1.71
CNOT3O75175 MIR217-201ENST00000384817 110 ntBASIC4.4□□□□□ -1.71
CNOT3O75175 AL133264.1-201ENST00000407157 562 ntBASIC4.4□□□□□ -1.71
CNOT3O75175 RAB28P1-201ENST00000411517 641 ntBASIC4.4□□□□□ -1.71
CNOT3O75175 PIGPP2-201ENST00000411569 458 ntBASIC4.4□□□□□ -1.71
CNOT3O75175 AC007899.1-201ENST00000412776 775 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms