Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 EIF5A2P1-201ENST00000564027 460 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN3O15551 MIR7851-201ENST00000610611 160 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AC107308.1-201ENST00000615897 301 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AC006213.5-201ENST00000619673 288 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 AP003355.3-201ENST00000623465 114 ntBASIC3.91□□□□□ -1.78
CLDN3O15551 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN3O15551 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN3O15551 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN3O15551 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
CLDN3O15551 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN3O15551 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN3O15551 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN3O15551 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN3O15551 SNORD6-201ENST00000365444 73 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLDN3O15551 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN3O15551 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLDN3O15551 MIR218-2-201ENST00000385006 110 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 ATP5F1P6-201ENST00000402768 767 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN3O15551 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN3O15551 HMGN2P31-201ENST00000432430 273 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 RPL21P110-201ENST00000433345 446 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AL512661.1-201ENST00000434586 1253 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AL590399.6-201ENST00000446396 307 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 ANP32BP2-201ENST00000454525 545 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 BX248409.1-201ENST00000455497 255 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN3O15551 AC078817.1-201ENST00000492623 435 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 SNORA70.18-201ENST00000516696 98 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 OR8K2P-201ENST00000524645 927 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AC091515.1-201ENST00000548110 679 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 MTCYBP28-201ENST00000566728 1132 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN3O15551 AC006270.2-201ENST00000578523 652 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AC017100.2-201ENST00000584628 355 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AC008739.3-201ENST00000603262 127 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN3O15551 AC012531.5-201ENST00000611375 151 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLDN3O15551 AL356118.1-201ENST00000635272 1078 ntBASIC3.9□□□□□ -1.79
CLDN3O15551 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN3O15551 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CLDN3O15551 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN3O15551 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 MTND5P28-201ENST00000438005 1594 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 AL365440.1-201ENST00000436135 2167 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN3O15551 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN3O15551 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 RNU6-1243P-201ENST00000364028 107 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 RNU6-283P-201ENST00000364788 107 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN3O15551 AC073264.1-201ENST00000411508 416 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN3O15551 AL158050.1-201ENST00000416077 457 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 AL389915.1-201ENST00000422463 466 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 MRPS18BP2-201ENST00000434310 759 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 AC073063.1-201ENST00000434352 607 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN3O15551 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN3O15551 EXTL2P1-201ENST00000446218 416 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 RPL21P23-201ENST00000446654 460 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN3O15551 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN3O15551 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 HMGN2P7-201ENST00000456186 273 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 RPL21P47-201ENST00000483696 477 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN3O15551 AC110768.1-201ENST00000509222 400 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 USP9YP5-201ENST00000511770 630 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN3O15551 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN3O15551 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN3O15551 RNU2-58P-201ENST00000516403 183 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 AP000926.4-201ENST00000527351 454 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 AC103843.2-201ENST00000530523 682 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 OR5B10P-201ENST00000532869 642 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN3O15551 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN3O15551 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN3O15551 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN3O15551 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN3O15551 AL009028.1-201ENST00000604895 802 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 BNIP3P4-201ENST00000604946 565 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 HMGN2P28-201ENST00000606102 262 ntBASIC3.89□□□□□ -1.79
CLDN3O15551 U3.45-201ENST00000607547 219 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms