Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
NDUFA1O15239 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
NDUFA1O15239 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
NDUFA1O15239 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
NDUFA1O15239 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
NDUFA1O15239 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 SNORA71.1-201ENST00000364523 117 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 SNORD21-201ENST00000383953 95 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 MIR7-3-201ENST00000384898 110 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.95□□□□□ -2.1
NDUFA1O15239 GCA-203ENST00000429691 824 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AL606490.7-201ENST00000433136 191 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 ST13P20-201ENST00000447996 1065 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AL162389.1-201ENST00000449233 177 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC1.95□□□□□ -2.1
NDUFA1O15239 PRSS3P4-201ENST00000453323 162 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 AC090525.1-201ENST00000479116 478 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 AC103975.1-201ENST00000482506 483 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.95□□□□□ -2.1
NDUFA1O15239 OR2A20P-203ENST00000498397 1268 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 RN7SKP282-201ENST00000516824 299 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.95□□□□□ -2.1
NDUFA1O15239 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC1.95□□□□□ -2.1
NDUFA1O15239 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.95□□□□□ -2.1
NDUFA1O15239 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC1.95□□□□□ -2.1
NDUFA1O15239 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.95□□□□□ -2.1
NDUFA1O15239 AC139713.2-210ENST00000641741 992 ntBASIC1.95□□□□□ -2.1
NDUFA1O15239 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NDUFA1O15239 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.95□□□□□ -2.1
NDUFA1O15239 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
NDUFA1O15239 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NDUFA1O15239 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NDUFA1O15239 AL445437.1-201ENST00000623157 3087 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NDUFA1O15239 MIR134-201ENST00000385258 73 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AL353692.2-201ENST00000407054 335 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 NIPA2P1-201ENST00000426223 976 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC1.94□□□□□ -2.1
NDUFA1O15239 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NDUFA1O15239 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC1.94□□□□□ -2.1
NDUFA1O15239 MRPL50P4-201ENST00000446432 475 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 Z75741.1-201ENST00000446793 314 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 BTF3P5-201ENST00000457252 467 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.94□□□□□ -2.1
NDUFA1O15239 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC1.94□□□□□ -2.1
NDUFA1O15239 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NDUFA1O15239 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.94□□□□□ -2.1
NDUFA1O15239 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AC010198.2-201ENST00000550612 259 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AC034105.4-201ENST00000568304 277 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AC009303.3-201ENST00000591103 736 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AL451074.6-201ENST00000608512 729 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AC069200.1-201ENST00000609511 323 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AL162574.2-201ENST00000614618 657 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AL355493.4-201ENST00000618530 292 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AL161637.1-201ENST00000622380 412 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 AC000123.2-201ENST00000623124 461 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.94□□□□□ -2.1
NDUFA1O15239 U6.105-201ENST00000637379 88 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NDUFA1O15239 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AC009501.3-201ENST00000605001 1352 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NDUFA1O15239 AP003122.5-201ENST00000527668 3766 ntBASIC1.94□□□□□ -2.1
NDUFA1O15239 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NDUFA1O15239 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
NDUFA1O15239 AC000403.1-201ENST00000613696 3585 ntBASIC1.93□□□□□ -2.1
NDUFA1O15239 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.93□□□□□ -2.1
NDUFA1O15239 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
NDUFA1O15239 MIR26A1-201ENST00000362205 77 ntBASIC1.93□□□□□ -2.1
NDUFA1O15239 SNORA63.1-201ENST00000362493 131 ntBASIC1.93□□□□□ -2.1
NDUFA1O15239 DEFA7P-201ENST00000382676 285 ntBASIC1.93□□□□□ -2.1
NDUFA1O15239 MIR183-201ENST00000384958 110 ntBASIC1.93□□□□□ -2.1
NDUFA1O15239 MIR591-201ENST00000385290 95 ntBASIC1.93□□□□□ -2.1
NDUFA1O15239 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NDUFA1O15239 MTND4P13-201ENST00000402078 1023 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms