Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL450338.1-201ENST00000407987 512 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM38O00635 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC004690.1-201ENST00000418216 328 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AC011233.1-201ENST00000422812 283 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AL365203.2-201ENST00000423444 196 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM38O00635 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM38O00635 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC000111.2-201ENST00000448200 210 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM38O00635 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC087385.1-201ENST00000475062 312 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AC068587.1-201ENST00000483613 781 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM38O00635 PTP4A1P6-201ENST00000531034 478 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM38O00635 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM38O00635 PARP1P2-201ENST00000556806 195 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM38O00635 ATP5J2P6-201ENST00000565203 266 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 AC022726.1-201ENST00000587475 207 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM38O00635 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC073648.5-201ENST00000603502 305 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AL008729.2-201ENST00000606393 473 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AC010424.2-201ENST00000607594 443 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM38O00635 AC005962.2-201ENST00000611427 652 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AL354976.1-201ENST00000613843 387 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AL359757.1-201ENST00000623176 255 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AL359740.1-201ENST00000624340 592 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM38O00635 AL596275.2-204ENST00000641628 552 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 AL596275.2-206ENST00000641957 626 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRIM38O00635 MTND4P29-201ENST00000503122 1372 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM38O00635 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM38O00635 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 AC009951.1-201ENST00000623674 2614 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM38O00635 AC139713.2-214ENST00000642059 1811 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRIM38O00635 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM38O00635 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM38O00635 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM38O00635 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM38O00635 OR56B2P-201ENST00000317102 954 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 SNORA70.2-201ENST00000364506 135 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 OR5H15-201ENST00000383696 930 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 U3.35-201ENST00000408405 208 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM38O00635 RPL23AP1-201ENST00000428990 471 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 AC016831.4-201ENST00000438302 307 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AL591503.2-201ENST00000442314 1005 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 ARL2BPP10-201ENST00000446487 531 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 BX276092.4-201ENST00000452056 248 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM38O00635 RPL18AP17-201ENST00000455326 198 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AL109741.2-201ENST00000455561 343 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM38O00635 AC103987.1-201ENST00000473394 348 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM38O00635 RNU2-30P-201ENST00000516209 141 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 MTND4LP26-201ENST00000518144 282 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 OR4A45P-201ENST00000529954 901 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC022882.1-201ENST00000532142 501 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 AC133555.2-201ENST00000550213 292 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM38O00635 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 RN7SL802P-201ENST00000577858 299 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 MIR4277-201ENST00000578298 84 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM38O00635 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM38O00635 AL590229.1-201ENST00000603497 542 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC007566.2-201ENST00000603642 413 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 AC078899.5-201ENST00000612475 178 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms