Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC074029.1-201ENST00000552531 1044 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AL136370.1-201ENST00000608166 691 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC112503.1-201ENST00000608436 391 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC090506.2-201ENST00000624521 419 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 MIR4496-201ENST00000635896 61 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDLIM1O00151 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PDLIM1O00151 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDLIM1O00151 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDLIM1O00151 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDLIM1O00151 XPOTP1-201ENST00000443317 2398 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PDLIM1O00151 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.66□□□□□ -1.82
PDLIM1O00151 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.66□□□□□ -1.82
PDLIM1O00151 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 MAPK10-362ENST00000641864 4484 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 RNU1-75P-201ENST00000347264 129 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 RNA5SP317-201ENST00000410176 116 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 RNU6-55P-201ENST00000411092 107 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 RNA5SP311-201ENST00000411290 116 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 RNU6-954P-201ENST00000411355 107 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 TAF13P2-201ENST00000416876 286 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 TRIAP1P1-201ENST00000427062 225 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC004975.1-201ENST00000428733 208 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.66□□□□□ -1.82
PDLIM1O00151 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.66□□□□□ -1.82
PDLIM1O00151 RPS4XP4-201ENST00000443195 763 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.66□□□□□ -1.82
PDLIM1O00151 SEPT14P24-201ENST00000447236 180 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AL050341.1-201ENST00000447743 313 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.66□□□□□ -1.82
PDLIM1O00151 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.66□□□□□ -1.82
PDLIM1O00151 RNU7-140P-201ENST00000459546 60 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 RPL7P5-201ENST00000471472 736 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDLIM1O00151 RPS4XP22-201ENST00000480755 780 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC126121.1-201ENST00000482313 553 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AC093801.2-201ENST00000503966 1050 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AC090071.1-201ENST00000507713 644 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 POU5F1P7-201ENST00000508759 541 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 RNU6-416P-201ENST00000516265 103 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 RNA5SP315-201ENST00000516340 116 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 RNA5SP312-201ENST00000517068 116 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AF279873.1-201ENST00000523393 313 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.66□□□□□ -1.82
PDLIM1O00151 NIFKP8-201ENST00000560500 874 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC090877.1-201ENST00000561418 344 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 AL591034.3-201ENST00000605511 685 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AL365400.2-201ENST00000605604 902 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC099785.1-201ENST00000605697 437 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 AC018645.2-201ENST00000609151 472 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AL512427.1-201ENST00000618593 349 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AL139089.1-201ENST00000620372 975 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDLIM1O00151 AC010608.2-201ENST00000624830 470 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 AL121594.5-201ENST00000631724 573 ntBASIC3.66□□□□□ -1.82
PDLIM1O00151 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.66□□□□□ -1.82
PDLIM1O00151 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDLIM1O00151 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDLIM1O00151 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PDLIM1O00151 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.65□□□□□ -1.82
PDLIM1O00151 AC025263.3-201ENST00000622965 1396 ntBASIC3.65□□□□□ -1.82
PDLIM1O00151 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDLIM1O00151 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.65□□□□□ -1.82
PDLIM1O00151 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM1O00151 ENSAP1-201ENST00000392855 326 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL603865.2-201ENST00000401679 213 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL022722.2-201ENST00000402519 180 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL583834.1-201ENST00000406943 343 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL356095.1-201ENST00000417217 199 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL009174.1-201ENST00000426577 416 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms