Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AP003066.2-201ENST00000529375 555 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC104229.1-201ENST00000561364 255 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL391497.1-201ENST00000608671 547 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AP005229.2-201ENST00000609980 697 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL713922.2-201ENST00000619384 716 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC022306.3-201ENST00000619930 550 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC068880.4-201ENST00000623082 495 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC006042.3-201ENST00000454684 1469 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AL645568.2-201ENST00000432815 1337 ntBASIC3.38□□□□□ -1.87
TRIM49D1C9J1S8 AC025125.1-201ENST00000624743 1922 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC066616.2-201ENST00000559334 1481 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 MIR122-201ENST00000385044 85 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 MIR620-201ENST00000385232 95 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL024507.1-201ENST00000412741 274 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 RPL36AP36-201ENST00000418616 301 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 MTCO3P4-201ENST00000419236 787 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 PNRC2P1-201ENST00000423940 420 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL160175.1-201ENST00000428124 247 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 MED6P1-201ENST00000439659 713 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 CDC27P1-201ENST00000445384 715 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 MOB1AP2-201ENST00000446060 614 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 TXNP6-201ENST00000510190 310 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 NPM1P41-201ENST00000512920 831 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC093510.2-201ENST00000562820 896 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 MIR5047-201ENST00000579212 100 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC020914.6-201ENST00000594327 272 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 DNAJC19P3-201ENST00000594491 331 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC010680.4-201ENST00000605334 543 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AL450489.1-201ENST00000612071 468 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 AC099669.2-201ENST00000616549 437 ntBASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
TRIM49D1C9J1S8 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 ZNF90P1-201ENST00000480493 1951 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 RNU6-609P-201ENST00000365459 107 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 BTF3P9-201ENST00000418784 283 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AL606495.1-201ENST00000422100 813 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 RPL7P55-201ENST00000450522 746 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 RPS27P29-201ENST00000463110 252 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 PLGLA-201ENST00000465668 449 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC087385.1-201ENST00000475062 312 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC114967.1-201ENST00000504890 259 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC016550.1-201ENST00000505348 785 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC112198.1-201ENST00000505369 1220 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 FTH1P9-201ENST00000513251 355 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
TRIM49D1C9J1S8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms