Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC093671.1-201ENST00000624981 2929 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 AC005725.1-201ENST00000577346 2607 ntBASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
PCDHGA11Q9Y5H2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC079753.1-201ENST00000623243 3868 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC096644.2-201ENST00000429278 159 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 USP9YP16-201ENST00000430287 407 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AL162388.1-201ENST00000450912 352 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 USP9YP23-201ENST00000455085 407 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 U8.20-201ENST00000459445 131 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 RN7SL393P-201ENST00000463588 296 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC008526.1-201ENST00000509149 338 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-264P-201ENST00000517134 104 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC139365.2-201ENST00000517972 253 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 RANP3-201ENST00000530970 276 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 TVP23CP2-201ENST00000571473 623 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 ATP5A1P2-202ENST00000616464 443 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AL162373.1-201ENST00000620433 407 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AP000550.3-201ENST00000637734 379 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF519P1-201ENST00000449011 1626 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 AC097461.1-201ENST00000568928 2821 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 EXOC5P1-201ENST00000510543 1969 ntBASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
PCDHGA11Q9Y5H2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
PCDHGA11Q9Y5H2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
PCDHGA11Q9Y5H2 SHQ1P1-201ENST00000437111 1544 ntBASIC6.09□□□□□ -1.44
PCDHGA11Q9Y5H2 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PCDHGA11Q9Y5H2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF33CP-201ENST00000432492 2030 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 OR55B1P-203ENST00000641518 2602 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC092692.1-201ENST00000623625 2595 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC103710.2-202ENST00000641454 2853 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 SNORD3E-201ENST00000362899 217 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-188P-201ENST00000364207 107 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RNA5SP85-201ENST00000365378 119 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR433-201ENST00000384837 93 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU11-201ENST00000387069 134 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 SOD2P1-201ENST00000396543 562 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU4-25P-201ENST00000410569 230 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL21P50-201ENST00000417698 477 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AL022324.2-201ENST00000434827 780 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC128677.1-201ENST00000436016 442 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC007383.1-201ENST00000445875 636 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RPS17P13-201ENST00000448974 407 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 PPIAP32-201ENST00000449940 472 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 PPIAP3-201ENST00000450588 505 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SL221P-201ENST00000466190 281 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 TRBV1-201ENST00000476502 284 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC114728.1-201ENST00000488289 483 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC015524.1-201ENST00000491585 472 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-1271P-201ENST00000517049 105 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms