Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 AC018555.1-201ENST00000567548 1980 ntBASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
PCDHGB1Q9Y5G3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AL442639.1-201ENST00000625030 1899 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC126755.2-208ENST00000327792 462 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC138969.1-213ENST00000331436 462 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AL672167.1-206ENST00000356293 943 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU4-21P-201ENST00000362802 126 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU1-63P-201ENST00000383902 164 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU1-82P-201ENST00000390851 165 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AL034374.1-201ENST00000406329 351 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 RAD23BP2-201ENST00000416003 1207 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AL022400.1-201ENST00000423946 935 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 CNOT7P1-201ENST00000429006 852 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 RPL7P29-201ENST00000437151 728 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 CACYBPP1-201ENST00000438592 684 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 COX6CP18-201ENST00000448769 222 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC073264.2-201ENST00000448886 166 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC079168.2-201ENST00000453977 416 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 ISCUP1-201ENST00000454451 448 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 NCOR1P1-202ENST00000486162 291 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC004069.2-201ENST00000505438 1114 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC109927.2-201ENST00000506416 303 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU2-30P-201ENST00000516209 141 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU6-720P-201ENST00000516363 108 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 PHBP17-201ENST00000528576 541 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC124293.1-201ENST00000530034 493 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AP006289.1-201ENST00000538089 277 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC107016.1-201ENST00000550463 337 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC012414.6-201ENST00000568241 401 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC090181.2-201ENST00000602975 672 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC073648.5-201ENST00000603502 305 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC011472.4-201ENST00000615848 491 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 DCAF13P3-201ENST00000561147 1334 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 AC109315.1-201ENST00000584143 1347 ntBASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 Y_RNA.3-201ENST00000362331 103 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU6-517P-201ENST00000384362 110 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 GLULP6-201ENST00000399502 913 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 RNU6-77P-201ENST00000410554 91 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 AC092745.2-202ENST00000411880 369 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 AL161449.1-201ENST00000414531 1199 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 AP001324.1-201ENST00000428553 399 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 USP9YP31-201ENST00000431405 881 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 MTND1P4-201ENST00000435196 415 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 RHOT1P3-201ENST00000436571 331 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 MTND1P1-201ENST00000445453 368 ntBASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGB1Q9Y5G3 AL935212.3-201ENST00000450729 284 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms