Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 MIR591-201ENST00000385290 95 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AL121978.1-201ENST00000402778 359 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 RPS16P5-201ENST00000406501 404 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 MIR1178-201ENST00000408396 91 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 RNA5SP56-201ENST00000410277 118 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 RPL21P112-201ENST00000434403 463 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 CYCSP43-201ENST00000438233 310 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 RPS29P31-201ENST00000446147 164 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC006480.1-201ENST00000449887 378 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC104073.1-201ENST00000451988 151 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC084198.1-201ENST00000477747 402 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 RPS3AP6-201ENST00000484430 795 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC011352.3-201ENST00000505162 593 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC091860.1-201ENST00000505723 432 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 OR8G5-201ENST00000524943 1041 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AP000790.1-201ENST00000528891 737 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 PSMB7P1-201ENST00000556349 514 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 MTATP6P2-201ENST00000603319 678 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC120053.1-201ENST00000607706 736 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC008759.3-201ENST00000613300 508 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AL354976.1-201ENST00000613843 387 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 MIR7151-201ENST00000617477 60 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC010608.2-201ENST00000624830 470 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 CIR1P2-201ENST00000514821 1342 ntBASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC118273.1-201ENST00000525324 3006 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC079741.1-201ENST00000321498 212 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 RNU1-85P-201ENST00000364127 164 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 RNU6-339P-201ENST00000384310 107 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AL139098.1-201ENST00000407291 389 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 RN7SKP229-201ENST00000410465 302 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 TOMM22P1-201ENST00000418578 312 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 SFR1P2-201ENST00000421841 730 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 UBE2V1P6-201ENST00000430840 422 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 CEACAMP9-201ENST00000442990 513 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 PTGES3P5-201ENST00000455109 434 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 RPL6P9-201ENST00000466502 859 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC048346.1-201ENST00000510247 144 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 MTCO3P44-201ENST00000510977 541 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 MTCO3P27-201ENST00000514397 196 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 RNA5SP164-201ENST00000516533 110 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 RNA5SP179-201ENST00000517284 121 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AP003355.1-201ENST00000518956 587 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AP003385.6-201ENST00000531603 374 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC037471.2-201ENST00000564941 598 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 MIR4738-201ENST00000579134 87 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 MIR4436B2-201ENST00000581415 91 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 MIR4436B1-201ENST00000583272 91 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AL669831.4-202ENST00000590817 238 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 KLKP1-201ENST00000595979 403 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AL163642.2-201ENST00000604722 1019 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC091167.4-201ENST00000605079 184 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AL513477.2-201ENST00000607858 568 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms