Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 SNORA20.1-201ENST00000364790 130 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 RNY1P14-201ENST00000384426 108 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AP000275.1-201ENST00000411943 390 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01347-201ENST00000417964 355 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 PGBD4P6-201ENST00000421501 610 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC113412.1-201ENST00000425840 504 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC099677.3-201ENST00000427081 395 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 NANOGP6-201ENST00000429190 847 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 BMS1P19-201ENST00000433925 393 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC006335.2-201ENST00000437993 330 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AL450996.1-201ENST00000445574 1202 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC104308.1-201ENST00000454621 333 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 SNORD127-201ENST00000458892 86 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 RN7SL72P-201ENST00000460697 269 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC233702.1-201ENST00000482905 502 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 CDC42P3-201ENST00000518493 633 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 HAUS8P1-201ENST00000549005 542 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 FKBP1AP1-201ENST00000594588 318 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AL133481.2-203ENST00000607558 139 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC097714.1-201ENST00000511272 1647 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC010615.1-201ENST00000594254 1764 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 MFSD8-239ENST00000641590 2479 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 RPS4XP5-201ENST00000419038 768 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AL356276.2-201ENST00000435919 558 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC105399.1-202ENST00000447303 205 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC004129.2-201ENST00000457229 287 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 RPL7P5-201ENST00000471472 736 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC022861.1-201ENST00000522981 663 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AP002812.4-201ENST00000532139 286 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AL512329.2-201ENST00000607350 548 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC018926.3-201ENST00000618841 406 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AC007938.2-201ENST00000604666 2634 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDZRN3Q9UPQ7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
PDZRN3Q9UPQ7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC004076.2-201ENST00000620532 3323 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.100-201ENST00000363141 102 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.270-201ENST00000364693 104 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.464-201ENST00000384282 110 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 RNU6-456P-201ENST00000384493 107 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 SNORD115.1-201ENST00000391109 76 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 RN7SKP158-201ENST00000410453 326 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 RN7SKP17-201ENST00000411242 351 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC012075.1-201ENST00000436549 580 ntBASIC7.33□□□□□ -1.24
PDZRN3Q9UPQ7 AC096775.1-201ENST00000437724 448 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms