Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 RNU1-87P-201ENST00000363727 170 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 MIR620-201ENST00000385232 95 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 RN7SL429P-201ENST00000479090 223 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 RN7SL489P-201ENST00000486185 223 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 RN7SL327P-201ENST00000488659 223 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 HMGB1P21-201ENST00000502313 581 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 MTATP6P22-201ENST00000507369 598 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC010342.1-201ENST00000514047 877 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 RN7SKP82-201ENST00000516786 223 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 YWHAZP1-201ENST00000556286 722 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC006077.1-201ENST00000604746 343 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC099785.1-201ENST00000605697 437 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC097504.2-201ENST00000608088 454 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 RN7SL853P-201ENST00000617250 223 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AL121594.5-201ENST00000631724 573 ntBASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.03□□□□□ -1.28
SHROOM4Q9ULL8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AC011266.1-201ENST00000624119 3569 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 MAPK10-253ENST00000641010 4072 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 XPOTP1-201ENST00000443317 2398 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 RNU6-1176P-201ENST00000390955 107 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AL138785.1-201ENST00000425821 331 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AC017083.1-201ENST00000428093 483 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 HSFY7P-201ENST00000432672 318 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 HSFY8P-201ENST00000437934 318 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 HSFY5P-201ENST00000453726 309 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AC119751.1-201ENST00000513357 765 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 TCP11X3P-202ENST00000514289 1254 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 OR7E13P-201ENST00000526052 910 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 OR5M7P-201ENST00000526140 972 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 MIR5004-201ENST00000579078 107 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 VN1R87P-201ENST00000596706 487 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AC133552.5-201ENST00000604266 540 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AL354760.1-201ENST00000608357 643 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AC009269.6-201ENST00000621778 588 ntBASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM4Q9ULL8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 RPL7P27-201ENST00000403775 720 ntBASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 FTH1P9-201ENST00000513251 355 ntBASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 AC022306.3-201ENST00000619930 550 ntBASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 AC139713.2-210ENST00000641741 992 ntBASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 AC068254.2-201ENST00000623938 3577 ntBASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM4Q9ULL8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SHROOM4Q9ULL8 RPL23AP57-201ENST00000332361 466 ntBASIC7□□□□□ -1.29
SHROOM4Q9ULL8 RNU6-236P-201ENST00000363886 106 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms