Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AADACP1-206ENST00000561502 1193 ntBASIC2.95□□□□□ -1.94
CHD7Q9P2D1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AC099063.3-201ENST00000642066 185 ntBASIC2.95□□□□□ -1.94
CHD7Q9P2D1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 TRGV5P-201ENST00000419915 354 ntBASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AC008280.2-201ENST00000455473 307 ntBASIC2.95□□□□□ -1.94
CHD7Q9P2D1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AC233702.9-201ENST00000581528 203 ntBASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 GVINP1-202ENST00000531871 7271 ntBASIC2.95□□□□□ -1.94
CHD7Q9P2D1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CHD7Q9P2D1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 AL031736.2-201ENST00000426573 787 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 RPL23AP71-201ENST00000470966 469 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 AC078817.1-201ENST00000492623 435 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 RN7SKP272-201ENST00000516988 232 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 RN7SKP192-201ENST00000411291 327 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 MTCO3P16-201ENST00000454456 754 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 GAPDHP39-201ENST00000481866 979 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 AC244205.2-202ENST00000635781 342 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 RPL7P26-201ENST00000333817 754 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 MTCO1P51-201ENST00000427672 1060 ntBASIC2.94□□□□□ -1.94
CHD7Q9P2D1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.94□□□□□ -1.94
CHD7Q9P2D1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 GNG5P5-201ENST00000420444 220 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 OR2X1P-201ENST00000421144 687 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC108210.2-201ENST00000503681 201 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 RPL7P20-201ENST00000520308 745 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AP001646.1-201ENST00000527936 915 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC243972.3-201ENST00000539655 198 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 MIR4727-201ENST00000622232 55 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC009039.2-201ENST00000624524 529 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC017007.4-201ENST00000503353 1352 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AL031595.2-201ENST00000624215 19071 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 DDX18P3-201ENST00000404856 2007 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 KATNBL1P2-201ENST00000433311 835 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 AC096644.4-201ENST00000563417 2912 ntBASIC2.93□□□□□ -1.94
CHD7Q9P2D1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHD7Q9P2D1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 RPS4XP6-201ENST00000477670 797 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 YWHAZP1-201ENST00000556286 722 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 AL592295.2-201ENST00000612578 206 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 MUC2-202ENST00000613187 4845 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 AC092593.1-201ENST00000515413 1815 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 TAB3P1-202ENST00000452645 1634 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 RNA5SP322-201ENST00000363617 119 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 AC022795.1-201ENST00000473808 480 ntBASIC2.92□□□□□ -1.94
CHD7Q9P2D1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHD7Q9P2D1 AC019080.5-201ENST00000624891 757 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms