Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 SNORA51.6-201ENST00000384151 125 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 RPL23AP47-201ENST00000408017 460 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 RNA5SP317-201ENST00000410176 116 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 RNA5SP311-201ENST00000411290 116 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 MTATP6P20-201ENST00000414147 562 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC108032.1-201ENST00000416706 207 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 RSL24D1P6-201ENST00000426934 401 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 TVP23BP2-201ENST00000455082 615 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 HMGB3P13-201ENST00000511263 607 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 RNA5SP315-201ENST00000516340 116 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 RNA5SP312-201ENST00000517068 116 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 OR10V3P-201ENST00000525712 725 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 HIGD1AP5-201ENST00000529959 259 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 VN1R83P-201ENST00000595685 445 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC008638.3-201ENST00000603341 463 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AL365400.2-201ENST00000605604 902 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC008083.4-201ENST00000615076 444 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AL121895.2-201ENST00000619558 447 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC009318.4-201ENST00000620496 486 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 MIR6810-201ENST00000622701 70 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC067931.1-201ENST00000624190 671 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AF001550.2-201ENST00000636643 217 ntBASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BLOC1S4Q9NUP1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 RNA5SP399-201ENST00000364003 117 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 RNU6-730P-201ENST00000383954 104 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 Y_RNA.493-201ENST00000384422 102 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 SNORA40.2-201ENST00000390847 128 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AL022722.2-201ENST00000402519 180 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 GTF2IP23-201ENST00000423746 351 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 OR5BE1P-201ENST00000425977 939 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AL353748.1-201ENST00000440753 474 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 FABP3P2-201ENST00000453169 399 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AC010469.1-201ENST00000463864 576 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 RPL23AP2-201ENST00000471227 466 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AC005921.1-201ENST00000510589 286 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AP004242.1-201ENST00000533701 349 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 YPEL5P3-201ENST00000547227 352 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AC090502.2-201ENST00000549267 280 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AC006270.2-201ENST00000578523 652 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 RPP40P2-201ENST00000603596 712 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AL139395.1-201ENST00000603662 160 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AC006338.2-201ENST00000616864 791 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 OR5BE1P-202ENST00000641168 1176 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02211-204ENST00000642024 1070 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 RLIMP1-201ENST00000339626 1680 ntBASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BLOC1S4Q9NUP1 AL157700.1-201ENST00000561973 1432 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 RNA5SP443-201ENST00000363083 132 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms