Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 UBE2L2-201ENST00000254302 429 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RNA5SP79-201ENST00000365193 109 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RNU6-1040P-201ENST00000383974 107 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RNA5SP251-201ENST00000410614 137 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 DPPA2P3-201ENST00000411853 655 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 GNAI2P2-201ENST00000417003 916 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AL590383.1-201ENST00000428602 75 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RPL12P18-201ENST00000437175 325 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC079922.1-201ENST00000443291 359 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC007000.1-201ENST00000453064 794 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RPL23AP31-201ENST00000456160 467 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RN7SL587P-201ENST00000459853 281 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC117395.2-201ENST00000463122 1128 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC104472.2-201ENST00000469035 601 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC109454.1-201ENST00000471205 498 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC097473.1-201ENST00000508142 408 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC008716.1-201ENST00000511084 513 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 SCARNA15.2-201ENST00000516409 127 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 MTCYBP13-201ENST00000578634 1093 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC026468.1-201ENST00000614981 107 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RMST_9.1-201ENST00000619945 193 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AC073488.3-201ENST00000631611 778 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 RPL36AP21-202ENST00000639134 430 ntBASIC8.06□□□□□ -1.12
RTN4Q9NQC3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RTN4Q9NQC3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 SNORD62.1-201ENST00000362541 86 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 RN7SKP76-201ENST00000364419 323 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 SNORA75B-201ENST00000384053 137 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 KRT18P52-201ENST00000404956 846 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 GEMIN2P2-201ENST00000418195 715 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC073900.1-201ENST00000429766 776 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 RPS27P18-201ENST00000431701 247 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AL137792.2-201ENST00000443484 235 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 MRPS21P1-201ENST00000453850 223 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 RPS3AP41-201ENST00000462701 778 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC040975.1-201ENST00000472104 316 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 RPS20P22-201ENST00000473700 357 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 RN7SL165P-201ENST00000477476 291 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AL049874.1-201ENST00000489560 388 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC009120.1-201ENST00000493458 473 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 OR5F2P-201ENST00000532761 941 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 RN7SL760P-201ENST00000607344 270 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AL512643.1-201ENST00000635735 524 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 Z97989.1-201ENST00000531702 2421 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AC110373.1-201ENST00000505994 3505 ntBASIC8.05□□□□□ -1.12
RTN4Q9NQC3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms