Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC107982.3-201ENST00000584957 985 ntBASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 AC006130.2-201ENST00000586202 326 ntBASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 AL356863.1-201ENST00000623378 1080 ntBASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 AF001550.2-201ENST00000636643 217 ntBASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 ZNF876P-202ENST00000398732 1485 ntBASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.29□□□□□ -1.72
POLR1BQ9H9Y6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 RNU6-216P-201ENST00000363282 104 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 RNU1-132P-201ENST00000364300 164 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 RNU6-621P-201ENST00000364752 109 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 RNA5SP22-201ENST00000365393 109 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 SNORA70E-201ENST00000384492 135 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AL451062.2-201ENST00000427515 271 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 RPL21P91-201ENST00000429231 479 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AL050321.1-201ENST00000432363 400 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 TPTE2P3-201ENST00000441562 1189 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AL451050.1-201ENST00000450126 415 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 RPL21P134-201ENST00000453468 483 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 FABP5P12-201ENST00000515543 389 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 OR4A45P-201ENST00000529954 901 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC087465.1-201ENST00000560574 245 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 CYP4A43P-201ENST00000568156 121 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC022916.3-201ENST00000592961 742 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 DUXAP3-201ENST00000603616 594 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC113403.1-201ENST00000604910 193 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC121761.2-201ENST00000617300 689 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 uc_338.13-201ENST00000618243 179 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 MIR4278-201ENST00000636094 69 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC009452.1-201ENST00000640823 606 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC011266.1-201ENST00000624119 3569 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 AL391684.1-202ENST00000641293 1636 ntBASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR1BQ9H9Y6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC018529.3-201ENST00000624212 2254 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 RNU1-130P-201ENST00000363930 160 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 TAF9BP1-201ENST00000396646 746 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 MTCYBP11-201ENST00000447254 1109 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 RPL37P6-202ENST00000464216 403 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 GAPDHP36-201ENST00000480688 918 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 MTND2P14-201ENST00000482139 351 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC116353.3-201ENST00000511215 249 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AC125611.1-201ENST00000549563 229 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 AL389895.1-201ENST00000554127 252 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 HIGD1AP17-201ENST00000554576 276 ntBASIC4.27□□□□□ -1.73
POLR1BQ9H9Y6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms