Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RNU1-134P-201ENST00000362935 165 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RNU1-65P-201ENST00000363919 148 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RNA5SP232-201ENST00000364144 119 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 U3.12-201ENST00000364498 214 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 Y_RNA.401-201ENST00000383965 117 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RNU6-1106P-201ENST00000390845 107 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 CISD1P1-201ENST00000393907 327 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RN7SKP86-201ENST00000410454 332 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AL358176.2-201ENST00000425769 204 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RPL7L1P10-201ENST00000427790 463 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 OR2AS1P-201ENST00000427827 319 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC108059.2-201ENST00000434626 151 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RPS7P3-201ENST00000443360 580 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RPL21P89-201ENST00000444021 467 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RNU7-180P-201ENST00000459240 63 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RNU6-1208P-201ENST00000459588 107 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 UBFD1P1-201ENST00000473259 814 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RPS27P20-201ENST00000492051 246 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 IGKV2-19-201ENST00000518132 283 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC022634.1-201ENST00000520765 532 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC078899.1-201ENST00000521432 1185 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AP000889.2-201ENST00000532684 490 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC063950.1-201ENST00000552036 308 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 MIR4424-201ENST00000585257 86 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 SMIM12P1-201ENST00000603004 274 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 RPL12P48-201ENST00000605620 304 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 AC235565.1-201ENST00000456962 1325 ntBASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
BHLHE41Q9C0J9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 GNL2P1-201ENST00000451274 2190 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AL442128.2-201ENST00000620246 1824 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AL139276.1-201ENST00000311910 1001 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 Y_RNA.28-201ENST00000362554 111 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 RNA5SP110-201ENST00000362638 115 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 MIR1282-201ENST00000408865 101 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 Y_RNA.605-201ENST00000410577 105 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AL358176.3-201ENST00000420757 454 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AL139396.1-201ENST00000421137 167 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 PMCHL1-202ENST00000423102 261 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 NPM1P18-201ENST00000434232 732 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AL359265.2-201ENST00000434367 631 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 MTND1P9-201ENST00000453775 944 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 RNU7-66P-201ENST00000459469 62 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC068305.1-201ENST00000497406 726 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC024558.1-201ENST00000505008 528 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 RN7SKP24-201ENST00000515888 284 ntBASIC5.63□□□□□ -1.51
BHLHE41Q9C0J9 WBP1LP3-201ENST00000523033 208 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms