Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AP002963.1-201ENST00000530590 184 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC013828.2-201ENST00000532487 235 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC133555.2-201ENST00000550213 292 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC091489.2-201ENST00000566263 604 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 BBIP1P1-201ENST00000602999 279 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 RPL23AP92-201ENST00000603609 255 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC007566.2-201ENST00000603642 413 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AL513477.2-201ENST00000607858 568 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC100793.4-201ENST00000613683 429 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AL022401.1-201ENST00000619498 108 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC026585.1-201ENST00000619582 524 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC009318.4-201ENST00000620496 486 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 AC097504.1-201ENST00000515103 2415 ntBASIC4.7□□□□□ -1.66
TRIM54Q9BYV2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 MAPK10-349ENST00000641767 3661 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AP001273.1-201ENST00000624493 3152 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 RNA5SP123-201ENST00000363244 119 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 RNU1-83P-201ENST00000363426 164 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 RNU6-289P-201ENST00000364093 107 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 MTCYBP36-201ENST00000404146 440 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 SPTLC1P2-201ENST00000407089 121 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 CDK8P2-201ENST00000415020 547 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 BX510359.3-201ENST00000422168 306 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC008065.1-201ENST00000428525 348 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC093414.1-201ENST00000434712 514 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 MTND1P34-201ENST00000438556 671 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 LSM1P1-201ENST00000438629 273 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC092641.1-201ENST00000440229 772 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 MTND5P14-201ENST00000441481 1267 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 Z80107.2-201ENST00000445127 392 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC239367.2-201ENST00000447309 705 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 OR52J1P-201ENST00000450596 932 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 HMGB3P21-201ENST00000452483 547 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 USP9YP34-201ENST00000453983 808 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 SNRPFP4-201ENST00000456366 242 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 PLGLA-201ENST00000465668 449 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC087312.1-201ENST00000471411 480 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 OR5M14P-201ENST00000506803 618 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC016065.2-201ENST00000514530 444 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AL391156.1-201ENST00000554965 554 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC079089.3-201ENST00000603094 673 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC090186.1-201ENST00000605991 572 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC010857.1-201ENST00000606398 594 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC097468.3-201ENST00000607956 456 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AC008121.2-201ENST00000614647 523 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 AL022578.1-201ENST00000439330 1433 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM54Q9BYV2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM54Q9BYV2 SAGE4P-201ENST00000442271 3381 ntBASIC4.68□□□□□ -1.66
TRIM54Q9BYV2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM54Q9BYV2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM54Q9BYV2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM54Q9BYV2 RNU6-777P-201ENST00000364265 104 ntBASIC4.68□□□□□ -1.66
TRIM54Q9BYV2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms