Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNORD88C-201ENST00000408061 91 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ACTG1P1-201ENST00000415794 1129 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL590139.1-201ENST00000416267 400 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PLA2G6-204ENST00000417303 501 ntTSL 4 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL353705.3-201ENST00000418694 1250 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PRAMENP-202ENST00000419303 1869 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL139281.1-201ENST00000422120 335 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MRPS21P2-201ENST00000424704 264 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PTMAP4-201ENST00000426188 346 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 HSPA9P1-201ENST00000432228 2029 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL772155.3-201ENST00000444097 578 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC073626.2-201ENST00000449443 316 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL430P-201ENST00000464176 242 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL591473.1-201ENST00000464297 313 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL361P-201ENST00000470785 298 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL184P-201ENST00000488308 297 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC093663.1-201ENST00000497190 394 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM197Y9-203ENST00000505707 345 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC233724.11-201ENST00000508480 404 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC010307.2-201ENST00000509051 466 ntTSL 4 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 TUBB4BP4-201ENST00000527023 304 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC055716.1-201ENST00000550077 495 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ACAP1-209ENST00000575415 317 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL493P-201ENST00000580401 299 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR4796-201ENST00000580742 81 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL378P-201ENST00000582657 298 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC006504.5-211ENST00000588636 576 ntTSL 4 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 HSPE1P7-201ENST00000604681 321 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL138963.2-201ENST00000605137 226 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RNA5SP357-201ENST00000607318 119 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 TP53TG1_1.1-201ENST00000612852 152 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL158077.1-201ENST00000616744 174 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL590491.1-202ENST00000618038 394 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL354751.3-201ENST00000618526 1027 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC024580.1-201ENST00000623020 674 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC009090.4-201ENST00000623921 3691 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AP001469.1-202ENST00000626933 695 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC135068.7-201ENST00000630145 568 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC007326.3-201ENST00000636418 176 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC138207.6-201ENST00000579164 1967 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LPA-202ENST00000447678 1839 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC010680.1-201ENST00000590024 3590 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms