Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC85AQ96PX6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CCDC85AQ96PX6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC85AQ96PX6 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.84□□□□□ -1.31
CCDC85AQ96PX6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC85AQ96PX6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC85AQ96PX6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 OR5P1P-201ENST00000299512 925 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 U8.4-201ENST00000363626 134 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 RNU6-169P-201ENST00000365336 107 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 RNU6-744P-201ENST00000365557 107 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 RNU6-1316P-201ENST00000384242 108 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 Y_RNA.579-201ENST00000390939 94 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL031679.1-201ENST00000400616 525 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 BEND7P1-201ENST00000422058 457 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC007161.1-204ENST00000423039 460 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC092651.1-201ENST00000426110 312 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC022022.1-201ENST00000430304 178 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 GSTM5P1-201ENST00000434751 660 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL356276.2-201ENST00000435919 558 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 RPL36AP15-201ENST00000444514 266 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC104651.2-201ENST00000447549 528 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 RPL23AP15-201ENST00000450202 459 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL356010.1-201ENST00000456364 102 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 MTCO3P2-201ENST00000457365 171 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 ST13P14-201ENST00000474095 734 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC090453.1-201ENST00000495560 436 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC108471.1-201ENST00000513977 287 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 RNU4-49P-201ENST00000516080 140 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC127381.1-201ENST00000555979 939 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 RPL10P14-201ENST00000565265 298 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 MIR3118-1-201ENST00000581787 76 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 MIR3668-201ENST00000582138 75 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 SNORD39.3-201ENST00000584451 71 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC008687.2-201ENST00000597865 520 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC024940.4-201ENST00000605507 246 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AL022345.1-201ENST00000607292 135 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC126915.2-201ENST00000610957 190 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC130324.3-201ENST00000614165 542 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 MIR6730-201ENST00000622213 67 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 AC006020.1-201ENST00000420179 1854 ntBASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CCDC85AQ96PX6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 MTND5P1-201ENST00000445440 1375 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 AL360270.2-201ENST00000562952 5985 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 RNA5SP507-201ENST00000363603 121 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 RNU4-1-201ENST00000363925 141 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 RNU1-43P-201ENST00000365052 165 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 Y_RNA.459-201ENST00000384251 102 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 MIR937-201ENST00000401271 86 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 RNU2-62P-201ENST00000410868 191 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 AC078974.1-201ENST00000411597 223 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 METTL15P3-201ENST00000415522 1221 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 AC073136.2-201ENST00000417282 849 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 AC127526.1-201ENST00000417526 366 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 RPL23AP74-201ENST00000437246 471 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 DDX3P2-201ENST00000446138 111 ntBASIC6.82□□□□□ -1.32
CCDC85AQ96PX6 SLC25A18P1-201ENST00000449385 454 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms