Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC108467.2-201ENST00000617640 1597 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
SYNGAP1Q96PV0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SYNGAP1Q96PV0 RN7SKP113-201ENST00000363891 295 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 RNU6-1322P-201ENST00000364309 107 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 HSPA8P15-201ENST00000401676 786 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL078599.1-201ENST00000402075 293 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL136131.1-201ENST00000406079 803 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 PDCL2P1-201ENST00000419302 352 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL353193.1-201ENST00000421444 268 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL353729.1-201ENST00000425044 720 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC023347.2-201ENST00000433994 462 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 MTCO1P27-201ENST00000448269 226 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC097484.1-201ENST00000471148 389 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC025674.1-201ENST00000507074 324 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL355375.2-201ENST00000574825 175 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 MIR5186-201ENST00000577504 120 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 MIR4433B-201ENST00000581329 102 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC209154.1-201ENST00000582156 337 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 MIR92B-201ENST00000607575 96 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 RMST_3.1-201ENST00000611651 109 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 RMST_7.1-201ENST00000621935 268 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 MIR1302-1-201ENST00000637932 143 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AC245100.2-201ENST00000454544 1679 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 INTS6P1-201ENST00000504674 2530 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 AL034549.2-201ENST00000618285 3373 ntBASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
SYNGAP1Q96PV0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 FRG1BP-201ENST00000278882 761 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 OR52B1P-201ENST00000316506 909 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 FRG1CP-201ENST00000358464 769 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 RNY3P3-201ENST00000363816 102 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 SNORA51.8-201ENST00000384234 132 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 MRPL42P2-201ENST00000403169 426 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 RNU6-908P-201ENST00000410160 94 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AL590399.4-201ENST00000436561 601 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 SEPT14P3-201ENST00000439401 183 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AL732372.2-207ENST00000445840 183 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 TRGVB-201ENST00000453257 471 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 SEPT14P2-201ENST00000453405 183 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC092324.1-201ENST00000468671 324 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 RPL23AP71-201ENST00000470966 469 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC058823.1-201ENST00000485315 474 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC091912.1-201ENST00000511351 248 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 SEPT14P4-201ENST00000513445 186 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 FO082796.1-201ENST00000523795 183 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AP003181.2-201ENST00000528941 181 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC008127.2-201ENST00000549925 1075 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC007424.1-203ENST00000554613 687 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms