Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP47Q96K76 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.34□□□□□ -1.71
USP47Q96K76 RPL7P8-201ENST00000411964 730 ntBASIC4.34□□□□□ -1.71
USP47Q96K76 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.34□□□□□ -1.71
USP47Q96K76 AC093716.1-201ENST00000435923 377 ntBASIC4.34□□□□□ -1.71
USP47Q96K76 ST13P14-201ENST00000474095 734 ntBASIC4.34□□□□□ -1.71
USP47Q96K76 RPS4XP22-201ENST00000480755 780 ntBASIC4.34□□□□□ -1.71
USP47Q96K76 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.34□□□□□ -1.71
USP47Q96K76 AC022080.3-201ENST00000544433 482 ntBASIC4.34□□□□□ -1.71
USP47Q96K76 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.34□□□□□ -1.71
USP47Q96K76 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP47Q96K76 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP47Q96K76 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP47Q96K76 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.34□□□□□ -1.72
USP47Q96K76 AC110792.3-201ENST00000595906 1614 ntBASIC4.34□□□□□ -1.72
USP47Q96K76 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.34□□□□□ -1.72
USP47Q96K76 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USP47Q96K76 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP47Q96K76 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.33□□□□□ -1.72
USP47Q96K76 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP47Q96K76 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.33□□□□□ -1.72
USP47Q96K76 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC011242.1-201ENST00000433596 1158 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.33□□□□□ -1.72
USP47Q96K76 RPL23AP22-201ENST00000437556 453 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC107083.1-201ENST00000439643 279 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 HMGN1P8-201ENST00000463578 288 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 SEC11B-201ENST00000518383 499 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.33□□□□□ -1.72
USP47Q96K76 AC034105.3-201ENST00000565294 442 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.33□□□□□ -1.72
USP47Q96K76 AP000919.1-202ENST00000581139 1264 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC009948.4-201ENST00000604692 675 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC107905.1-201ENST00000616204 426 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 AC131238.1-201ENST00000617135 328 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP47Q96K76 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP47Q96K76 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
USP47Q96K76 RIOK3P1-201ENST00000418778 1528 ntBASIC4.33□□□□□ -1.72
USP47Q96K76 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP47Q96K76 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP47Q96K76 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
USP47Q96K76 NACA3P-201ENST00000359690 648 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 RNU6-1251P-201ENST00000364502 107 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 AC245291.1-201ENST00000419501 328 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
USP47Q96K76 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.32□□□□□ -1.72
USP47Q96K76 AC105402.2-201ENST00000438503 358 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.32□□□□□ -1.72
USP47Q96K76 AC099063.2-201ENST00000446360 662 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 AC117440.1-201ENST00000474107 571 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.32□□□□□ -1.72
USP47Q96K76 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.32□□□□□ -1.72
USP47Q96K76 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.32□□□□□ -1.72
USP47Q96K76 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.32□□□□□ -1.72
USP47Q96K76 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.32□□□□□ -1.72
USP47Q96K76 ATP5A1P2-202ENST00000616464 443 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 AL590240.3-201ENST00000621416 943 ntBASIC4.32□□□□□ -1.72
USP47Q96K76 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.32□□□□□ -1.72
USP47Q96K76 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP47Q96K76 SNORA5B-201ENST00000363786 132 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 NCSTNP1-201ENST00000406229 144 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.31□□□□□ -1.72
USP47Q96K76 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.31□□□□□ -1.72
USP47Q96K76 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.31□□□□□ -1.72
USP47Q96K76 HMGB3P6-201ENST00000444896 598 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 HMGB1P5-202ENST00000451497 985 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 CALM1P2-201ENST00000452941 448 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 RPL21P8-201ENST00000465083 535 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 RN7SL429P-201ENST00000479090 223 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 RN7SL489P-201ENST00000486185 223 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 RN7SL327P-201ENST00000488659 223 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 RN7SL20P-201ENST00000488827 297 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 RPL5P23-201ENST00000496040 868 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.31□□□□□ -1.72
USP47Q96K76 NPM1P35-201ENST00000533043 868 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 AC006023.1-201ENST00000603944 259 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 AC034236.3-201ENST00000605999 461 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 RN7SL853P-201ENST00000617250 223 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 AC004972.1-201ENST00000623934 2209 ntBASIC4.31□□□□□ -1.72
USP47Q96K76 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP47Q96K76 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.3□□□□□ -1.72
USP47Q96K76 U3.11-201ENST00000364476 212 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 RNU6-891P-201ENST00000384280 111 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 RPL7P25-201ENST00000404151 721 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 AL160175.1-201ENST00000428124 247 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 MTND6P18-201ENST00000439477 513 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.3□□□□□ -1.72
USP47Q96K76 BUD31P2-201ENST00000449374 300 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 AC140076.1-201ENST00000449897 361 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.3□□□□□ -1.72
USP47Q96K76 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.3□□□□□ -1.72
USP47Q96K76 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.3□□□□□ -1.72
USP47Q96K76 AL591516.1-201ENST00000611326 274 ntBASIC4.3□□□□□ -1.72
USP47Q96K76 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.3□□□□□ -1.72
USP47Q96K76 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.3□□□□□ -1.72
USP47Q96K76 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP47Q96K76 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
USP47Q96K76 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms