Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4□□□□□ -1.77
VPS33AQ96AX1 OR5D17P-201ENST00000531492 978 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC012182.1-201ENST00000570133 895 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4□□□□□ -1.77
VPS33AQ96AX1 MIR4480-201ENST00000582492 71 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 RPL23AP92-201ENST00000603609 255 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AL160237.3-201ENST00000604114 1013 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC113403.1-201ENST00000604910 193 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AC124312.4-201ENST00000605533 310 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC211433.2-201ENST00000608433 387 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AL158163.2-201ENST00000619110 700 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4□□□□□ -1.77
VPS33AQ96AX1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS33AQ96AX1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4□□□□□ -1.77
VPS33AQ96AX1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 MTND4P10-201ENST00000446199 1363 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 MTCO1P23-201ENST00000415223 1526 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 SNORA51.2-201ENST00000364595 132 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC016769.3-201ENST00000396562 315 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AL136310.1-201ENST00000404926 654 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 RNU2-42P-201ENST00000410697 113 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 RNU4-78P-201ENST00000410940 126 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 NRBF2P2-201ENST00000413087 861 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 MFSD13B-201ENST00000420133 1290 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 HSFY1P1-201ENST00000423928 1178 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 USP9YP9-201ENST00000429406 715 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 USP9YP31-201ENST00000431405 881 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AL512326.1-201ENST00000443050 721 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 VN1R10P-201ENST00000447106 875 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AL589880.1-201ENST00000448271 287 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC073264.2-201ENST00000448886 166 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 RPL5P32-201ENST00000454085 879 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 RPL35AP28-201ENST00000459730 331 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC092757.1-201ENST00000467293 467 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 RPL32P9-201ENST00000487963 407 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 IGKV2-38-201ENST00000517443 247 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC128687.2-201ENST00000609657 566 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC006329.2-201ENST00000611491 394 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 MIR6780A-201ENST00000615089 68 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 AC112200.1-201ENST00000625015 234 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.99□□□□□ -1.77
VPS33AQ96AX1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS33AQ96AX1 CDR1-202ENST00000625883 1485 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 OR4K15-201ENST00000305051 1216 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 RNVU1-6-201ENST00000364688 164 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 RNU6-413P-201ENST00000384115 107 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 ARF4P3-201ENST00000397387 509 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 RNA5SP36-201ENST00000410197 133 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL161449.1-201ENST00000414531 1199 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 RPS3AP37-201ENST00000419176 745 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 OR10R1P-201ENST00000441524 1141 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL513533.1-201ENST00000453728 415 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 RN7SKP31-201ENST00000516354 278 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms