Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC4Q92889 RPS15AP1-201ENST00000457423 391 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 RPSAP50-201ENST00000481955 852 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC006499.2-201ENST00000513470 337 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 RN7SKP244-201ENST00000516513 307 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC025881.1-201ENST00000518851 512 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 ARL2BPP5-201ENST00000523141 481 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC092490.3-201ENST00000545370 572 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
ERCC4Q92889 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.37□□□□□ -1.55
ERCC4Q92889 ZNF519P3-201ENST00000557158 1032 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC4Q92889 MIR4443-201ENST00000585052 53 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC006116.3-201ENST00000592968 361 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC006566.1-201ENST00000608943 513 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AP001521.1-201ENST00000609150 300 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC116651.1-201ENST00000609724 556 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC109347.2-201ENST00000610220 349 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 MIR7155-201ENST00000615925 56 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC005086.4-201ENST00000623065 213 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC4Q92889 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 AC099654.2-201ENST00000433031 1980 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC4Q92889 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC4Q92889 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ERCC4Q92889 Y_RNA.248-201ENST00000364501 109 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ERCC4Q92889 Y_RNA.582-201ENST00000391023 95 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 MIR548F1-201ENST00000408667 84 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AC234782.4-201ENST00000417646 1048 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.36□□□□□ -1.55
ERCC4Q92889 OR8F1P-201ENST00000425243 930 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 RPS27P18-201ENST00000431701 247 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
ERCC4Q92889 MTND3P21-201ENST00000433774 331 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AL451139.1-201ENST00000434718 346 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 RPS26P40-201ENST00000435209 294 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.36□□□□□ -1.55
ERCC4Q92889 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC4Q92889 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC4Q92889 EEF1E1P1-201ENST00000446998 430 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC4Q92889 AC003071.1-201ENST00000451219 789 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AC091564.1-201ENST00000464563 479 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.36□□□□□ -1.55
ERCC4Q92889 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.36□□□□□ -1.55
ERCC4Q92889 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.36□□□□□ -1.55
ERCC4Q92889 RN7SKP298-201ENST00000515950 94 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 Y_RNA.719-201ENST00000517156 106 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.36□□□□□ -1.55
ERCC4Q92889 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC4Q92889 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.36□□□□□ -1.55
ERCC4Q92889 AC115085.1-201ENST00000588924 229 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 PSMA6P4-201ENST00000603247 718 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AC010857.1-201ENST00000606398 594 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 AP001596.2-201ENST00000608410 312 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.36□□□□□ -1.55
ERCC4Q92889 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.36□□□□□ -1.55
ERCC4Q92889 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.36□□□□□ -1.55
ERCC4Q92889 AL359922.3-201ENST00000624779 1670 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC4Q92889 MTND5P26-201ENST00000426018 1752 ntBASIC5.36□□□□□ -1.55
ERCC4Q92889 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC4Q92889 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC4Q92889 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ERCC4Q92889 AL133243.3-201ENST00000617415 3004 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC4Q92889 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ERCC4Q92889 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AC134882.1-201ENST00000603738 1676 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 MTND4P16-201ENST00000466108 1367 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC4Q92889 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.35□□□□□ -1.55
ERCC4Q92889 RNY4P24-201ENST00000362735 96 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 Y_RNA.97-201ENST00000363094 102 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC4Q92889 RNU6-297P-201ENST00000384636 107 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 MIR92A2-201ENST00000385299 75 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 MIR708-201ENST00000390708 88 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 RNU1-82P-201ENST00000390851 165 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 U3.30-201ENST00000391308 210 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AL645927.1-201ENST00000396783 406 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AC073264.1-201ENST00000411508 416 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 EIF4A1P3-201ENST00000411521 244 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms