Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 MTND5P28-201ENST00000438005 1594 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
DDX1Q92499 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
DDX1Q92499 RNY4P14-201ENST00000363656 96 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 RNU6-146P-201ENST00000384602 108 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 MT-TD-201ENST00000387419 68 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 CCNG1P1-201ENST00000406783 885 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
DDX1Q92499 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.5□□□□□ -1.53
DDX1Q92499 RPS20P15-201ENST00000412792 311 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.5□□□□□ -1.53
DDX1Q92499 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.5□□□□□ -1.53
DDX1Q92499 AL389915.1-201ENST00000422463 466 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 AC104837.2-201ENST00000427236 424 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AL360081.1-201ENST00000428299 555 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.5□□□□□ -1.53
DDX1Q92499 RPS29P10-201ENST00000439197 166 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC010683.1-201ENST00000473673 378 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AC005726.1-201ENST00000494679 427 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 ENPP7P11-201ENST00000505915 627 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AC093824.1-201ENST00000508796 343 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 Y_RNA.701-201ENST00000516812 110 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC092490.3-201ENST00000545370 572 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 HSPE1P3-201ENST00000559254 309 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AC006960.3-201ENST00000561845 705 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC103792.1-201ENST00000603591 919 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.5□□□□□ -1.53
DDX1Q92499 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC124864.2-201ENST00000624736 186 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 AP002001.2-201ENST00000529025 1469 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
DDX1Q92499 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
DDX1Q92499 AC026523.2-201ENST00000625039 7739 ntBASIC5.5□□□□□ -1.53
DDX1Q92499 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.49□□□□□ -1.53
DDX1Q92499 AL031119.1-201ENST00000404707 1879 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
DDX1Q92499 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
DDX1Q92499 AC011493.1-201ENST00000596753 1632 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
DDX1Q92499 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
DDX1Q92499 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
DDX1Q92499 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 Y_RNA.263-201ENST00000364659 114 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 RNU6-1293P-201ENST00000384077 107 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 Y_RNA.453-201ENST00000384223 109 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AL121972.1-201ENST00000402023 252 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AL390316.1-201ENST00000406279 553 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 VN1R8P-201ENST00000407739 893 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.49□□□□□ -1.53
DDX1Q92499 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
DDX1Q92499 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.49□□□□□ -1.53
DDX1Q92499 RBMY2QP-201ENST00000429799 1147 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.49□□□□□ -1.53
DDX1Q92499 AC007677.1-201ENST00000445757 515 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 PSPHP1-201ENST00000450062 261 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.49□□□□□ -1.53
DDX1Q92499 TRBV26-201ENST00000456572 344 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AC245028.2-201ENST00000458673 253 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.49□□□□□ -1.53
DDX1Q92499 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.49□□□□□ -1.53
DDX1Q92499 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.49□□□□□ -1.53
DDX1Q92499 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.49□□□□□ -1.53
DDX1Q92499 OR4A45P-201ENST00000529954 901 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.49□□□□□ -1.53
DDX1Q92499 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.49□□□□□ -1.53
DDX1Q92499 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.49□□□□□ -1.53
DDX1Q92499 AC005261.5-201ENST00000596280 355 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.49□□□□□ -1.53
DDX1Q92499 Z95327.3-201ENST00000610385 572 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AC091834.1-201ENST00000614543 472 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.49□□□□□ -1.53
DDX1Q92499 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 RNU6-156P-201ENST00000621869 107 ntBASIC5.49□□□□□ -1.53
DDX1Q92499 AP003122.6-201ENST00000623831 495 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms