Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP003730.1-201ENST00000524605 285 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC008127.2-201ENST00000549925 1075 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC007954.1-201ENST00000554198 494 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC067852.4-201ENST00000590314 478 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC024560.3-201ENST00000608482 349 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC009090.3-201ENST00000616553 565 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 AC015871.5-202ENST00000623252 701 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 FP325313.1-201ENST00000638228 703 ntBASIC4.51□□□□□ -1.69
HMGB4Q8WW32 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
HMGB4Q8WW32 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 DDX18P3-201ENST00000404856 2007 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC130650.2-201ENST00000618736 2403 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 OR10J6P-201ENST00000289731 930 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RNU6-500P-201ENST00000362349 107 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 Y_RNA.18-201ENST00000362461 102 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RNU4-44P-201ENST00000363050 141 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RNU1-132P-201ENST00000364300 164 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RNA5SP317-201ENST00000410176 116 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RNA5SP311-201ENST00000411290 116 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC019178.2-201ENST00000423595 505 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AL590103.1-201ENST00000434488 307 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 OR4C10P-201ENST00000434991 931 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 MTND4P32-201ENST00000437189 1237 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 MTND4P6-201ENST00000438297 472 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 KATNBL1P3-201ENST00000443475 909 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 MTND2P4-201ENST00000445034 1004 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC104073.1-201ENST00000451988 151 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 DHFRP3-201ENST00000455595 559 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RPS7P7-201ENST00000463499 571 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC053481.1-201ENST00000467217 306 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RPL7P1-201ENST00000468161 747 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RPL7P9-201ENST00000468715 747 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RPS15AP17-201ENST00000470598 390 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC041039.1-201ENST00000485656 536 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 HMGB3P16-201ENST00000508037 287 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RNA5SP315-201ENST00000516340 116 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RNA5SP312-201ENST00000517068 116 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 LARP7P2-201ENST00000575306 125 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 MIR3915-201ENST00000578518 97 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 MIR4637-201ENST00000582405 84 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AL596327.1-201ENST00000603629 213 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AL358072.1-201ENST00000604156 575 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC113403.1-201ENST00000604910 193 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC105129.3-201ENST00000605455 485 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AL591034.3-201ENST00000605511 685 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC091931.1-201ENST00000623488 728 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AC231657.1-201ENST00000624313 397 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 PCMTD1P7-201ENST00000634506 357 ntBASIC4.5□□□□□ -1.69
HMGB4Q8WW32 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGB4Q8WW32 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 OR4G11P-202ENST00000642116 1414 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 NEAT1-202ENST00000501122 22743 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AL359922.3-201ENST00000624779 1670 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 MIR331-201ENST00000362302 94 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 MIR134-201ENST00000385258 73 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 ENSAP1-201ENST00000392855 326 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 ARF4P3-201ENST00000397387 509 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AL022722.2-201ENST00000402519 180 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AL031577.2-201ENST00000404133 280 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC004987.3-201ENST00000413879 771 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms