Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL353597.2-202ENST00000434901 373 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 AL450263.2-201ENST00000439400 589 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC010655.1-201ENST00000449336 292 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC098824.1-201ENST00000453565 980 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC099560.2-201ENST00000457554 255 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 S100A11P2-201ENST00000467589 312 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 RPS3AP14-201ENST00000483907 780 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 PTGES3P3-201ENST00000511479 482 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 SUMO2P20-201ENST00000520803 283 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 C1DP5-201ENST00000525775 383 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 MTATP6P15-201ENST00000527233 835 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC011611.1-201ENST00000552179 197 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 MIR4672-201ENST00000583126 81 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 CKS1BP3-201ENST00000600888 237 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC091057.2-201ENST00000602594 792 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC069431.2-201ENST00000604149 1099 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AL450336.1-201ENST00000605180 586 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC233309.1-201ENST00000619522 751 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC004943.3-201ENST00000624116 600 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC127502.3-201ENST00000636170 1206 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNED1Q8TER0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNED1Q8TER0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNED1Q8TER0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNED1Q8TER0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 RPL22P22-201ENST00000395439 379 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AL024507.1-201ENST00000412741 274 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 ATP5HP2-201ENST00000433885 485 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC092809.1-201ENST00000441469 474 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 NPM1P17-201ENST00000479221 602 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC020699.1-201ENST00000505161 445 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 MTCO3P27-201ENST00000514397 196 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 HNRNPKP5-201ENST00000515300 253 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AP003355.1-201ENST00000518956 587 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 UBE2NP1-201ENST00000545592 458 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 SETP1-201ENST00000556014 845 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 TRAV15-201ENST00000556680 249 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC023824.3-201ENST00000569003 562 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC110760.3-201ENST00000598794 467 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 RPP40P2-201ENST00000603596 712 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC080013.6-201ENST00000606185 215 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AP003392.5-201ENST00000607857 415 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC116447.1-201ENST00000613153 453 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 ASNSP1-201ENST00000518311 1939 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 GNG5P1-201ENST00000255500 204 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 BX842559.1-201ENST00000419615 532 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 OR6C64P-201ENST00000419708 825 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC013262.1-201ENST00000426710 252 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 USP9YP28-201ENST00000435142 589 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 MTND6P18-201ENST00000439477 513 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC006445.1-201ENST00000491925 405 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms