Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
LYSMD3Q7Z3D4 ZNF734P-201ENST00000419494 1534 ntBASIC6.2□□□□□ -1.42
LYSMD3Q7Z3D4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LYSMD3Q7Z3D4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.2□□□□□ -1.42
LYSMD3Q7Z3D4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 MRE11P1-201ENST00000464884 2127 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 MTND5P7-201ENST00000413558 1798 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC024587.1-201ENST00000505925 2157 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 RNU6-28P-201ENST00000362378 107 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 Y_RNA.60-201ENST00000362831 98 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 RNU1-85P-201ENST00000364127 164 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 RN7SKP15-201ENST00000364742 309 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 LCN1P2-201ENST00000372030 223 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 Y_RNA.428-201ENST00000384078 102 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 SNORA51.6-201ENST00000384151 125 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 GCNT1P4-201ENST00000404096 329 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 COX6CP15-201ENST00000426313 211 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AL359265.2-201ENST00000434367 631 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 RPL21P133-201ENST00000443666 476 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AL355032.1-201ENST00000472981 438 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC131281.1-201ENST00000522984 164 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 RNU4ATAC-201ENST00000580972 127 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC060771.1-201ENST00000582031 164 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 MIR4701-201ENST00000583094 63 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC110743.1-201ENST00000584870 478 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC078899.3-201ENST00000599065 212 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC092447.9-201ENST00000603395 144 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC008555.7-201ENST00000605008 583 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AL627230.1-201ENST00000613077 211 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AL138726.1-201ENST00000614873 333 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 MIR6128-201ENST00000615528 109 ntBASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD3Q7Z3D4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 OR10R3P-201ENST00000361688 942 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 Y_RNA.152-201ENST00000363578 100 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 RNU1-59P-201ENST00000364829 162 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 RNU6-1207P-201ENST00000384343 107 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 Y_RNA.485-201ENST00000384395 102 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AL109755.1-201ENST00000401791 649 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AL133384.1-201ENST00000412744 351 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AL354707.3-201ENST00000427308 331 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 SNAP23P1-201ENST00000433229 246 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 MTND5P15-201ENST00000434246 349 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 YWHAZP8-201ENST00000436935 731 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 SNORD127-201ENST00000458892 86 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AP000893.1-201ENST00000474462 794 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 RPL7AP10-201ENST00000481016 791 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC093815.1-201ENST00000508637 280 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC090958.1-201ENST00000511122 351 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 MTND1P19-201ENST00000511780 315 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 Y_RNA.708-201ENST00000516950 96 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC011979.2-201ENST00000527568 352 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 DEFB109D-201ENST00000529497 240 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AL137161.1-201ENST00000532231 390 ntBASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.18□□□□□ -1.42
LYSMD3Q7Z3D4 AC135001.1-201ENST00000544546 283 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms