Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 MOB1AP1-201ENST00000430903 535 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC073143.1-201ENST00000436316 395 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 USP9YP22-201ENST00000438971 294 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 RPL23AP81-201ENST00000455252 467 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 PNPLA4P1-201ENST00000458328 305 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC005410.1-202ENST00000460347 485 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 NDUFA5P9-201ENST00000472609 340 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 RNU6-311P-201ENST00000516224 102 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 IGKV2D-23-201ENST00000518179 286 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 OR5M7P-201ENST00000526140 972 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 HSPE1P14-201ENST00000605812 302 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 AC011944.2-201ENST00000624440 683 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 Z99496.1-201ENST00000469424 1477 ntBASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUP54Q7Z3B4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC067945.1-201ENST00000342609 618 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RNU4-92P-201ENST00000363783 136 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RNVU1-3-201ENST00000364313 161 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RNU6-413P-201ENST00000384115 107 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC097374.1-203ENST00000400783 485 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RNU4-25P-201ENST00000410569 230 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 MIR1911-201ENST00000410783 80 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RPL23AP26-201ENST00000412728 464 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 SSR1P2-201ENST00000415208 787 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 FCF1P2-201ENST00000415284 583 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 SEPT7P5-201ENST00000434048 306 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RPL23AP52-201ENST00000439311 478 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC007327.1-201ENST00000447461 264 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RPL7P22-201ENST00000466005 733 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 RPL35P6-201ENST00000490024 372 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AL592156.1-201ENST00000508758 304 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 PARP4P3-201ENST00000510265 317 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC006116.5-201ENST00000591936 559 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC114781.5-201ENST00000615297 108 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC026634.1-201ENST00000634369 198 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms