Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC006539.2-201ENST00000601729 572 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC025165.5-201ENST00000602802 578 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC112230.1-201ENST00000604342 547 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AL139286.1-201ENST00000604465 483 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AL513477.2-201ENST00000607858 568 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC083809.1-201ENST00000615051 472 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC091931.1-201ENST00000623488 728 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AC015813.6-201ENST00000624409 5808 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.17□□□□□ -1.58
LONRF3Q496Y0 AL445523.1-201ENST00000451184 1362 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 MAPK10-303ENST00000641324 3959 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 SNORA70F-201ENST00000384142 135 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AL021407.1-201ENST00000404531 386 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 RN7SKP267-201ENST00000410381 285 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 MTCO3P5-201ENST00000433620 714 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 RPL23AP16-201ENST00000441715 421 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 MTCO2P25-201ENST00000447065 681 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC097262.1-201ENST00000452559 548 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 RFC5P1-201ENST00000454419 874 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC005008.1-201ENST00000456151 612 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 MTCO3P2-201ENST00000457365 171 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 RPL5P24-201ENST00000463742 885 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 MTND4LP3-201ENST00000468320 276 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC079395.1-201ENST00000510981 262 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC010587.2-201ENST00000511727 448 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 IGKV1-32-201ENST00000519290 311 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 ZNF705CP-201ENST00000530515 889 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AL110118.1-201ENST00000553543 400 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC138915.2-201ENST00000569776 97 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 RN7SL690P-201ENST00000582087 240 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 SLC25A36P1-201ENST00000590111 465 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AL390838.2-201ENST00000602394 274 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 DUXAP11-201ENST00000603858 526 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC010738.1-201ENST00000604970 987 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC008966.2-201ENST00000606157 453 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC135507.1-201ENST00000607214 561 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC131235.4-201ENST00000609288 620 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AL121873.1-201ENST00000616013 524 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC098679.4-201ENST00000624241 654 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC116618.1-201ENST00000634617 774 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 KARSP3-201ENST00000571212 1504 ntBASIC5.16□□□□□ -1.58
LONRF3Q496Y0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LONRF3Q496Y0 DHX40P1-201ENST00000588725 1412 ntBASIC5.15□□□□□ -1.58
LONRF3Q496Y0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LONRF3Q496Y0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
LONRF3Q496Y0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.15□□□□□ -1.58
LONRF3Q496Y0 PABPC1P7-201ENST00000413177 1513 ntBASIC5.15□□□□□ -1.58
LONRF3Q496Y0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 SNORA62-201ENST00000365493 153 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 MT-TC-201ENST00000387405 66 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 BTF3L4P1-201ENST00000413813 468 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 CEACAMP8-201ENST00000413902 580 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AL161449.1-201ENST00000414531 1199 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 RPL18P10-201ENST00000425606 538 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC092017.2-201ENST00000427600 362 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 RPL23AP1-201ENST00000428990 471 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 VDAC1P6-201ENST00000430062 855 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 ELOCP8-201ENST00000439309 332 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 251.7 ms